Lysinibacillus macroides: I6G82_12790
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Entry
I6G82_12790 CDS
T08056
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lmac
Lysinibacillus macroides
Pathway
lmac02024
Quorum sensing
lmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G82_12790 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6G82_12790 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmac03019
]
I6G82_12790 (hfq)
03036 Chromosome and associated proteins [BR:
lmac03036
]
I6G82_12790 (hfq)
Messenger RNA biogenesis [BR:
lmac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I6G82_12790 (hfq)
Chromosome and associated proteins [BR:
lmac03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
I6G82_12790 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
QPR66179
LinkDB
All DBs
Position
complement(2523813..2524043)
Genome browser
AA seq
76 aa
AA seq
DB search
MKSVNLQDAFLNQLRKNNIFVTVFLLNGFQLKGTVKSYDNFTVLLMDAEQKQHLIYKHAI
STFVPAKQVEVLETEG
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagttaatttgcaagatgcgtttttaaatcaactacgcaaaaacaatattttt
gtaactgtctttttattaaatggatttcagctaaagggaacggtgaaatcctatgacaat
tttaccgttttattaatggatgctgaacaaaagcaacatcttatctacaagcatgccatt
tctacattcgttccagcaaagcaggtagaagttttggagacagaaggataa
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