Lysinibacillus macroides: I6G82_14840
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Entry
I6G82_14840 CDS
T08056
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lmac
Lysinibacillus macroides
Brite
KEGG Orthology (KO) [BR:
lmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmac03400
]
I6G82_14840 (addB)
Enzymes [BR:
lmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G82_14840 (addB)
DNA repair and recombination proteins [BR:
lmac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
I6G82_14840 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QPR66554
LinkDB
All DBs
Position
complement(2956448..2959957)
Genome browser
AA seq
1169 aa
AA seq
DB search
MTLRIVSGRSGTGKSAFIYKEIVEQLKSDPLGHPIFIIVPDQMSYSTEYELTNKHGVQGL
IRAQVMTFKRLAWLVLQETGGIARKEVNGYGYRMLIRKLLEEQQSEFSLFRQAAGKRGFT
EEIEALLKEFSRYSVNSTVLAEVTASLKAIDAPHTLQAKASDLHVVLQALEEQLGTTYVD
SEGYYPILTEQLKYAETMKQATIYIDGFTAFTVRELELVRELLKVTRQVTVVLPFDHMDE
AFDEQALFHEGALTHQRLHDIVQEEGIEVDAPIHFYQPRRFYSNDLQHIEAGFADIVPQT
KKTAGDVQVFEASNRRAEVHAIAREITKLTKEDGYRYRDIVLLYRQAELYDPLITSIFQQ
YEIPIFTNTKKTMLHHPLIELSRSALEVITSNWKYEPVFRSVKTDLFFPLQAELAIWRER
ADRLENYCLAQGIYGERWFEESRWFYKKYRGLEFHSRVQTDEERAMQAEIEAIRDEIRQP
LKNLQDQLERAQTGRAIATALFEFVEVLHVYDKLQALKDRELERGDVLAASEHEQAWHEW
VAVLDQFVYMFGEQELSVEEAAKILDEGFDTLEFSRIPPTLDEVMVATVDLARLSDIKAA
FVVGMNDGVYPTRMDYEGLLSDTEREWFSQIGYELAPSSVNRLLQENFLFYRAVTTPSQK
LYITYPSADEEGKALLASIYIKKIIGNTSTPGLLCDVPVERVVIDPIELLEGDALPYLRH
PRTALAHLMVQLRQAEHSRELAPEWLALQKFYKQDPYWTLIFERVRYPITHKNKAEPLET
YITQELYGQKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRLETFAMGDLFHEALKWI
TEETHRQQLSWIRLTKQQIKQLARQAVEQIVPVFSQQILLSSARYRYIQRKLIRIVERTM
TALTQHANVSHFKPIAIEASFGLGQNEQLPPLEIDLTGGKKMFMRGRIDRVDSATIDNRS
YLRIVDYKSSARDLDLNEVYYGLSLQVLTYLDVAMENSSYWLPGETEPAGVLYVHVHNPM
LKLDKDLTDSEIEEDRLKQYKMKGLLAENAEAILSMDEQLEEKSGHSKIIPVYMKKDGTP
SESQSRIVPVDDMKNLQHFVRRKHQEAGNGILAGDTDISPYKLKTKTACDYCQFAAVCQF
DPTDGKQSYRQLVQAKPNEIVDKIRKEME
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcgtattgtttcggggcgttcaggaacagggaagtccgcttttatttataag
gaaattgtcgagcaactcaagtcagatccattaggtcatcctatttttattattgttcct
gatcagatgtcctattctacagaatatgaactcacgaataaacatggtgtacaaggctta
attcgtgcacaggtgatgacatttaaacgtttagcatggcttgtgttgcaggaaacaggt
gggattgctcgtaaagaagtaaatggctatggttatcgcatgctgattcgcaaattgtta
gaggaacaacaaagcgaattctctttatttcgacaagctgctggcaaacgtggctttaca
gaggaaattgaagcgctgttaaaggagtttagccgttatagtgtcaatagcactgtttta
gcagaggtaacagcctcgttaaaggcaattgatgcacctcatacattacaggctaaagca
agtgatttgcatgttgtgttacaggcattagaggaacagcttggtacaacctatgtcgat
agtgagggctattatccaattctaactgagcaattaaaatatgcagaaacaatgaaacag
gcgactatttatattgatggttttacagcctttactgtgcgagagctagagctagtgcga
gaattattaaaggttacaagacaagtaacagttgttctaccattcgatcatatggatgag
gcattcgatgagcaggctttatttcatgagggggcattaacccatcagcgactacatgat
attgtacaggaagaaggcattgaagttgatgcaccaatccatttttatcaaccaagacga
ttttattccaatgatttgcaacatatagaggctggatttgctgatatagtgccgcaaaca
aaaaaaaccgcaggagatgtacaggtctttgaggcgtctaatcgccgagcagaggtgcac
gccattgcccgggaaataacaaagttaactaaggaagatggttatcgttatcgtgatatt
gtactactatatcgccaggcagaattatatgatccacttattactagtatttttcaacaa
tatgaaattcctatttttacaaatacaaaaaagacaatgcttcaccatccattaattgag
ctaagtcgctccgcattagaggttataacctctaattggaaatatgagcctgtttttcgt
agtgtcaaaacagatttatttttcccattacaggctgagttagcgatttggcgtgagcgt
gcagatcgtttagaaaattattgcttagcacaggggatttatggagaacgttggtttgag
gagtctcgttggttttataaaaaatatcgtggcttagagttccattcgcgtgtacaaaca
gatgaggaacgagcaatgcaggcagaaatcgaggccattcgagatgaaattcgtcaacca
ttaaaaaatttgcaggatcagcttgaacgagcgcaaacaggacgagcaatagcaactgct
ttatttgagtttgtagaggtattgcacgtttatgataagcttcaagccttgaaggatcgt
gagcttgagcgaggcgatgtattagcagcaagcgagcatgagcaggcgtggcatgaatgg
gtagctgtgctggatcaatttgtttatatgtttggagagcaggagctgtctgtggaggaa
gcggcaaagattcttgatgaagggtttgatacattagaattttcgagaattccgcctacc
ttagatgaagtaatggtagcgacagttgatttagcgcgactttccgatataaaagcagct
tttgtagtagggatgaatgatggtgtttatccaacccgaatggactatgagggcttatta
tcggatacagaacgtgaatggtttagtcaaattggctatgagcttgccccatcctccgtt
aatcgcctattgcaggagaattttctattttaccgcgcggtgacaacgccatctcagaag
ctttatataacatatccttcagcagatgaagaggggaaggcgttgctagcttccatctat
ataaagaaaataattggcaatactagcacacctggcctattatgtgatgtcccagtagaa
cgtgttgtcattgacccaattgaattgttagagggcgatgctttaccctatttacgtcat
ccgcgtaccgctttagcgcatctgatggtgcagctgcgtcaggctgaacatagccgtgaa
ctagcaccagaatggctggcattgcaaaaattttataaacaggacccttattggacatta
atttttgaacgtgtgcgctatccgattacccataaaaataaggcagagccgctggaaacc
tatattacgcaggaattgtatggacaaaagctaacttcaagtgtttctcgcattgagaaa
tattttagatgtccattttcccatttcacaacgtatggtttacgtttagaggaacgtgct
gaatatcgcttggaaacctttgcaatgggtgatttattccatgaagccttaaagtggatt
acagaagaaacacatcgacagcagctgtcgtggatacggctaacaaagcagcaaattaaa
caattagcacgtcaggctgtggagcaaattgtgccagtcttttcacagcaaattttacta
tcaagtgcgcgctatcgctatattcaacgtaaacttattcgtattgttgagcgaacaatg
acagcattaacacagcatgccaatgtctctcactttaagccaattgctattgaggcatcg
tttgggctaggacagaatgagcagctaccaccgcttgaaattgatttaacaggtggcaaa
aaaatgtttatgcgaggacgcattgatagagtggatagtgcaacaatcgataatcgctct
tatttacgcatcgtcgattataaatcatcagctcgtgatttggacttaaacgaagtgtat
tatggactgtccttacaggttctcacttatttagatgtggctatggaaaacagctcttat
tggctgccaggcgaaacagagccagccggtgtcctatatgttcacgtccacaatccaatg
ctaaagctcgataaggatttaacagatagcgaaatcgaagaggatcgtttaaagcaatat
aaaatgaagggactgctcgctgaaaatgctgaggctattttatcgatggatgagcaacta
gaggaaaagagcggacattctaaaattattcccgtttatatgaaaaaagacgggacacca
tctgaatcacaatcacgtattgtgcctgtcgatgatatgaagaatctacagcactttgta
cggcgcaagcatcaggaagcagggaatggtattttagctggtgatacagatattagccca
tataaattaaaaacaaaaacagcttgtgattattgtcaatttgccgcggtttgtcagttt
gatccaactgatggcaagcaaagctatcgccagttagtacaggcaaagccgaatgaaatt
gttgataaaattcggaaggagatggagtaa
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