Secundilactobacillus malefermentans: FGL90_00260
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Entry
FGL90_00260 CDS
T06836
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lmae
Secundilactobacillus malefermentans
Pathway
lmae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGL90_00260 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_00260 (mutM)
Enzymes [BR:
lmae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FGL90_00260 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FGL90_00260 (mutM)
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FGL90_00260 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF8512
Zn_ribbon_6
DUF7573
DZR
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QEA30735
LinkDB
All DBs
Position
complement(45409..46245)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVRRGLTNLVKNAVINSVEVRYLKMVSPESPLFEQALQGKTIERIDRRGKYL
LFRFNDHLTMVSHLRMEGKYDVQPEGSVVTKHTHVIFHLSDGRELRYTDTRKFGRMRLIN
TGDESVIPGLKAMGPEPTEKTLKLDYMKKIFRKSHRTIKPFLLDQSKIAGLGNIYVDETL
WLSQINPLQQTDELPDEKIADLRDAIIDEIGIAIKGHGTTVHSFSTAFGEAGNFQNHLHV
YGKQGEPCERCGTTIEKIKVAQRGTHFCPHCQPIIGDK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagttgaaacagttcgtcgtggtttaacgaatttggtgaaaaat
gccgtaattaatagtgtggaggtcagataccttaagatggtttcaccagaatctccgctt
tttgaacaggcgttgcaagggaaaacaatcgaaaggatcgatcgtcgcgggaaatactta
ctttttaggtttaacgatcatttaacgatggtttctcatctgagaatggaaggtaagtat
gatgtacaaccagagggatctgtggtcactaagcacacccatgtcatttttcacttatcg
gatggtcgtgagctaaggtacacagatacaagaaaattcggacgaatgcgattgattaat
accggggatgaaagtgtcattccagggctgaaagccatgggacccgagccaacggaaaaa
acgttaaaactcgattatatgaagaaaatttttcgaaaaagtcaccgaacaatcaaacca
ttcttacttgatcaaagcaaaatcgccggattgggtaacatttatgttgatgagacactt
tggctaagtcagataaacccactacaacagacggatgagctaccggatgaaaagattgct
gacctgagggatgctattattgatgaaataggtattgcaattaaaggacacggcactacg
gtacattccttttcaactgcttttggagaggcgggtaattttcagaatcatcttcacgtt
tatggtaagcagggggaaccatgtgagcgttgtggaacaactatcgagaaaataaaggtt
gcacaaagaggcacgcatttttgtccccattgtcagccaattataggagataaataa
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