Secundilactobacillus malefermentans: FGL90_00610
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Entry
FGL90_00610 CDS
T06836
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmae
Secundilactobacillus malefermentans
Pathway
lmae03410
Base excision repair
lmae03430
Mismatch repair
lmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGL90_00610 (recJ)
03430 Mismatch repair
FGL90_00610 (recJ)
03440 Homologous recombination
FGL90_00610 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_00610 (recJ)
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FGL90_00610 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FGL90_00610 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FGL90_00610 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEA30801
LinkDB
All DBs
Position
complement(118276..120597)
Genome browser
AA seq
773 aa
AA seq
DB search
MIKSQYKWNVKNVDQPSDEAKKLGQELELDPIICQILINRGYEDADSIQNFLNPNPDQLA
DPLLMHDMQRGIDRIEEAVSNSEKITVYGDYDADGVTSTAIMYEALDQLGAEVEFYIPNR
FSDGYGPNVEAFKKIIENGTTLIITVDNGVSGNEAIAAANKLNCDVVVTDHHELPEQLPD
AYAIIHPRFPGSNYPFGGLSGAGVAFKVVTALLQEIPQDALDLVAIGTVADLVPMTGENR
VLVYYGLQAISQTARLGLSALIKEAKINPEELDEQSIGFGIAPRLNALGRLNDAAPAVEL
LTTVDEDRATELARDVESQNKERQELVKQISLEAEAQADTETNRNSQTLIIDGNNWHEGV
LGIVASRIVEKTGKPTIVLNRDSTTGRAKGSGRSVDGFDLFSALDGHRDLMVNFGGHAMA
VGMTTTIDNINQVREALEQEADKQKLSEQERSQVKVAATLNLADTTMDFFHLMKRLAPFG
TDNLEPLFRFDPDSISGVKVMGADKTHLRFKLGQNGKSLDAIAFGKGSLAKDIQNGPNDT
EIIGCLDLNVWKGRSTLQVMVKDVLVSGTQLFIKRTNQLNQQMFQKSGVYLFFHKKIMTQ
LLPFIGENAQGILFEDFSIQQVNPETVIYIVDCPDTIEDLGGILKQVKPSKIVLYLYKKQ
PISLLGMPERAQYAKLFKFVETHRNVDIAHQMDELAKYLEINRNVLVFMIQVFFEVGFVQ
VSQGLMSGAAKPSRVDLAAAPSYQLREQQIETEEKLLLSNANELKVWLQTQLV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaatcacaatataaatggaatgttaaaaatgttgatcaaccatctgatgaagca
aaaaaattaggtcaggaattagaacttgatccgattatttgccaaatattaattaataga
ggctatgaagatgcagattcaattcaaaactttttgaatccgaatcctgatcaattagct
gatcctttattaatgcatgatatgcaacgtggaattgatcgtattgaggaagctgtttca
aacagcgaaaaaataaccgtttacggggactatgatgctgatggcgtcactagcaccgcc
attatgtatgaggcattggaccagcttggcgctgaggttgagttttatattccaaatcga
tttagtgatggttatgggccaaacgtcgaagcctttaaaaaaataatcgagaacgggaca
actttaattattacagtagataatggggtttctggtaatgaagccatcgccgccgccaat
aagttgaactgtgatgttgttgtaaccgatcatcacgaattacctgaacaactaccagat
gcttacgcgattattcaccccagatttccaggaagtaactatccatttgggggcctttca
ggggcaggtgttgcgtttaaagtggtgaccgcacttctacaagagataccacaggacgca
cttgatttagtggcaattgggacagttgctgatttagtgccaatgactggagaaaatcga
gtactcgtttattatgggttacaagcaatttcgcaaactgccaggttagggttatcagct
ttgattaaagaagccaaaattaatcctgaagaacttgatgagcaaagtattggatttggc
atcgcaccaagactgaacgcgttaggtcgactaaatgatgctgcaccagcggttgagctc
ctaacaacggttgatgaagatcgagcaacagaactcgctcgagatgttgaaagccaaaat
aaagaacgacaggaattagttaaacaaatcagtttagaagctgaagcgcaggctgacaca
gaaactaatcgtaacagccaaacgttaattattgatggtaataattggcatgaaggtgtt
ttaggaatagttgcgagtcgtatcgttgaaaaaacgggaaaaccgaccattgttttaaat
cgtgattctacaaccggacgggccaagggatcggggagaagcgttgatggcttcgatctt
ttttctgctttagatggacatcgtgatttaatggtcaattttggtggtcatgcgatggcc
gtgggaatgaccacgactattgataacattaatcaagttcgagaggcacttgagcaagaa
gccgacaagcaaaaattaagtgagcaagaaaggtcgcaagttaaggttgcagctacgcta
aatttagccgatacaacaatggactttttccacttgatgaagcgacttgcaccgtttgga
actgataaccttgaaccactttttcgatttgacccagacagtatttctggcgtaaaggta
atgggtgcagataaaacgcatttacgttttaaattaggacagaatgggaaatccttagac
gccattgcgtttggaaaaggatcgcttgcaaaagacattcagaatggcccgaatgacact
gaaattattggttgcctagatcttaacgtttggaaaggtagatctaccctacaagtaatg
gtaaaggatgttcttgtgagtgggactcagctctttattaaacgaacgaatcaattaaac
caacaaatgtttcaaaaatctggtgtttacctctttttccataagaaaataatgacccaa
ttgcttccgtttataggagagaatgcccaaggtatcctttttgaagatttttcaatccag
caagttaatccggaaacggttatctatattgttgattgtccagatacaattgaagaccta
gggggcattcttaaacaagtaaaacctagcaaaattgtgctgtatttgtacaaaaagcag
cctatttcgcttttggggatgccagaacgcgctcagtatgctaaactgtttaagttcgtg
gaaacacacagaaatgttgatattgcccatcaaatggatgaattggcaaagtatttagaa
attaatcggaacgtattagtatttatgatacaagttttctttgaggtagggttcgttcag
gttagtcaaggcctaatgagtggcgctgctaaaccaagtagagtcgatttagcagctgct
ccaagctatcaattaagagaacaacaaattgaaacagaagaaaaactactgctaagtaat
gcaaatgagctaaaagtttggttgcaaacgcagctagtttaa
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