Secundilactobacillus malefermentans: FGL90_00710
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Entry
FGL90_00710 CDS
T06836
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lmae
Secundilactobacillus malefermentans
Pathway
lmae03030
DNA replication
lmae03430
Mismatch repair
lmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGL90_00710 (holA)
03430 Mismatch repair
FGL90_00710 (holA)
03440 Homologous recombination
FGL90_00710 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmae03032
]
FGL90_00710 (holA)
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_00710 (holA)
Enzymes [BR:
lmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGL90_00710 (holA)
DNA replication proteins [BR:
lmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGL90_00710 (holA)
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGL90_00710 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
FtsH_ext
USH1C_N
DNA_pol3_gamma3
DUF6376
Motif
Other DBs
NCBI-ProteinID:
QEA30820
LinkDB
All DBs
Position
complement(144221..145255)
Genome browser
AA seq
344 aa
AA seq
DB search
MTFDEFLKQIDSNKIKNVALVLGDQSYLQQKIKKNLKTLIPADELTMNFASYDMETTSIS
QAISDASSAPFFGEKRLVFVNNPYFFTGSTHKGSKVNHNLDDLLDYLQHPEPSTILVFFA
PYDKLDSRKKISKQLKSVAEIIDISNLKEPQIKRIIKNELEQDNFQIKPSAEQLLLERTN
GDLTLIMNELPKLKLYCHSSKLVDDDAVRGLVTKTLDQNVFDLVGAVLSQNTARAIRLYQ
ELLLSKVEPLQINAILVSQFRLLLQVQILTRHGYSQGTLASTLKVHPYRVKLSLQTVKHF
NVLLLQKAYLGLIDVEKKLKSTTQNPETLFELFMVQFTDEVMTA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgatgagtttttaaaacaaattgattcaaataaaattaagaatgttgcttta
gttcttggtgatcagtcttatttacagcaaaaaattaaaaagaatttaaagacccttatt
ccagcggacgagcttaccatgaattttgccagttatgacatggaaacgacttccatttcc
caggcaatttcggatgcctcatcagcacctttttttggagagaaaagactggtttttgtt
aataacccatatttctttacgggatcaactcacaaaggaagcaaagttaatcataactta
gatgatctactcgattacttacagcatcctgagccaagtactatcctagttttctttgca
ccatatgataagcttgattctcgcaaaaaaatttcaaagcaattaaaatctgttgcagaa
ataattgatatcagcaatctaaaagagccacaaattaaacgaataataaagaacgaactt
gaacaggataattttcaaattaagccatctgcagagcagttacttctcgaaagaactaat
ggtgatttaacgttgatcatgaatgaattgccaaaattaaagctttattgccattcctca
aagttagttgatgatgatgcagtgaggggactcgttacgaaaacgctagaccagaacgta
tttgatttggtaggagcagtgctgagtcaaaatactgcacgcgcaatcagactatatcag
gaactattactttcaaaggtggaaccgttacaaataaatgccatattggtgagccagttt
cgattattgttacaggtgcagatacttacgcgacatggctatagtcagggaacgttagca
agtacgttaaaggtccatccatatagagtcaaactatcactgcaaacagttaagcatttc
aatgttttattattgcaaaaagcctatcttggattaattgatgttgaaaagaaattaaaa
tcaacaactcaaaatcccgaaacattgtttgaattatttatggtacagtttacagatgag
gttatgacggcataa
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