Secundilactobacillus malefermentans: FGL90_04260
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Entry
FGL90_04260 CDS
T06836
Name
(GenBank) helicase SNF2
Organism
lmae
Secundilactobacillus malefermentans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DEAD
SWIM
HDA2-3
DUF4012
Motif
Other DBs
NCBI-ProteinID:
QEA31456
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Position
871849..875142
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AA seq
1097 aa
AA seq
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MKEHNIPKRFWDRGEAIAKSGKVIINSIDRNNHVIEATVYGSTPYHVTLRQNELEDDSCT
CPFFDGNGFCKHVAAVIELLESENRPLETLFDDIADANDRISKTDTSIVQASEAADRFFN
MLKERRNKTVEADHSGEEFLDQLSLPRQQYFQPIADDASTQLKLEVTLFVDSLDPYWDNP
NAQNRLLIRLRIASKAQNRFYIISRIQEFLEAYKIGGDLHTAGKQVFHINKESFSSPDQQ
FLDYLLLMQPDIVPDEHQINRNRDLLLPPLYVSHLLDLSQSLPDFQFVLDDKHYDLIEQE
TFAPDNGLITAEIKSVADGYNLSITVQPQTQVQANLFDISGNVFYSTTPLQMTLLSNIIS
TYKLSLQRHSMLKLPGEPLERAALHFSAGQVAELNQFVANFKKIGEITVPDELKTVQMVP
HFDLSHAGNQLDLALSYEYESGLVAEADAAELPEASRNLQMEQQSQQYLRQLQFIPANNT
WSKDFSSGAALYRFFAQELPNLRLNGVVTVSDDLNDLVADASDLDSSVAVSENGGLLAVD
FNFKGIDEHEVDHILNELDKNQPYITREDGTIVLVDESLKKISTALTQVRKWANQPIKNG
QLTVSNTQALAVQAVLGKDAHFDEKFLKLTQNLAHPELFDVQPSHRVHATLRPYQKVGVQ
WLEMLNSYHFGGILADDMGLGKTIQMIAFLLNHLDKDKPSLIISPASLIYNWQAEFEKFA
PEMIVEVVDGSKSNRVAVIEQGDADVLITSYNSARLDVAEYEQRKINYLVLDEAQYVKNS
STKTNQSLQKLNPTNTFALSGTPIENRIEELWAIFQLVMPGLLPSKKEFKKLDPQEIALR
VKPFILRREKMTVLKDIPAKVESNLTNEMTKEQKTVYLAQLKQMQVKIQGMSSESFVKNK
IAILAGLTRLRQICDTPALYLDDYQDSSGKLEQLTEIVNQAIENNRHVLIFSQFTSMLDI
IKQRLDAEHHDSFMLQGNTKPKDRLAMVNSFNQGDKNLFLISLKAGGTGLNLTGADMVIL
VDLWWNPAVEDQATARAHRIGQKKEVDVFRLITNGTIEEQIYKLQEKKRNFVDQVLSGTQ
NKGSLTEDEVRLILGID
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacataacattccaaaaagattctgggatcgtggtgaagcaattgccaaatcc
ggaaaagtaattatcaattcaatcgatcgaaataaccacgtcattgaagcgacggtttac
ggatcaactccctatcacgtcacgcttagacaaaatgaattagaagatgactcctgcacc
tgtccattttttgatggcaacggtttttgtaaacacgttgctgccgtcatcgaactgctt
gaatcagaaaatcgcccattagaaaccctgttcgacgatatagcagatgccaacgatcgt
atttccaaaacggatacgtcaatcgtccaggccagtgaagctgctgaccgcttcttcaac
atgctcaaagaacgccgaaataaaaccgttgaagcagatcatagcggtgaagaatttttg
gatcaattatccttacctcggcagcaatatttccaaccaattgccgatgacgcatcaaca
caactcaaacttgaagtaaccctatttgtcgatagtttggatccatactgggataatccc
aacgcccaaaatcgactgctcattcggctgcgaatcgcgtcaaaggcccaaaatcggttc
tacattattagtcgaattcaagaatttttagaagcctacaaaattgggggcgacctgcac
actgctggtaaacaggttttccacattaataaggaatcattttcaagtccagatcaacaa
tttctggattacctcttactcatgcaacccgatatcgtccccgatgaacaccaaattaat
cgaaaccgcgacttactattaccaccactgtacgtctcccatttgctggacctaagtcaa
tcattacccgactttcaattcgtgttagacgacaaacactacgatttgattgagcaggaa
acttttgcaccagataatggcctcattaccgctgaaattaaatccgttgcggacggttat
aatttaagcattacggtacaaccgcaaacccaagtccaagcgaacctatttgatatttcg
ggcaacgttttttattcaacaacgcccctccaaatgacgttactatcgaacattatcagc
acgtataaattatcacttcagcgccattcgatgctcaaactacccggcgagccactcgaa
agagcagccctacatttttcagctggacaggtcgccgaattgaaccaatttgtcgctaac
tttaagaaaattggtgagattaccgtccccgatgaattaaaaacagttcaaatggtgccc
cattttgatttaagtcatgccggtaatcagctcgatttagcactctcctacgaatacgaa
tcagggctggttgctgaagcggatgcagctgaactgcccgaagcatcccgaaacttgcaa
atggaacaacagtcacagcaatatctccgccagttacagttcattccggccaataatact
tggtccaaagacttttccagtggcgcagcactgtatcgtttctttgcgcaagaacttccc
aatttacgcctaaacggggtggtcaccgtcagcgatgatctaaacgatttggtcgccgac
gcatcagacctcgattcctcggtcgcggtcagcgaaaatggtggcttactggccgttgac
ttcaacttcaagggcattgatgaacacgaagttgaccacattttaaatgagctggataag
aatcagccctacatcactcgggaagatgggacaattgttttagttgatgaatcgttaaag
aaaattagtaccgctctcacccaagttcgaaaatgggccaatcaacccattaaaaatggg
caattaaccgtctcaaatacccaagcacttgccgttcaggccgtgctaggtaaggatgcc
cattttgatgaaaagtttttaaaacttacgcaaaatttagctcatccggaactatttgac
gttcagcccagccacagggttcacgcaactctccgtccctatcaaaaagtcggtgttcaa
tggctagaaatgttgaattcttaccattttggcgggattcttgctgacgatatgggtctt
ggaaaaacgattcaaatgattgcctttttgctgaaccatttggataaggacaagccgagt
ctgattatttcacccgcctcccttatttataactggcaggctgaatttgaaaaatttgca
ccagaaatgatcgttgaagttgtggatggtagcaaatccaaccgcgtcgccgtgattgag
cagggagacgctgacgttctcatcaccagttacaatagcgctcgccttgacgttgctgag
tatgagcaacgcaagattaactacttggttcttgatgaagcgcagtacgttaagaattca
agcaccaaaacgaaccagagcctacaaaagctgaatccaacgaacacgtttgccctctct
gggacacccattgaaaatcggattgaggagctttgggccattttccagctggtcatgcct
ggcttgctccccagcaaaaaagaattcaaaaagttagatccgcaagaaatcgccttgcgc
gttaaaccgtttattttacgacgggaaaagatgaccgttctaaaggacatccctgccaag
gtcgaatccaatctgaccaacgagatgaccaaggagcaaaagaccgtctatctagctcaa
ctcaagcaaatgcaggttaaaattcaagggatgtcgagcgagtcatttgttaagaataaa
attgccatcttggcaggacttactcgtctccgtcaaatttgtgatacaccagcgctttac
ctggatgattatcaagatagctctggcaaattggaacagctgactgagattgtgaaccaa
gccatcgaaaacaatcgtcacgtgctgattttctctcaatttaccagcatgctggacatc
attaaacaacgcttagatgcggaacatcacgatagctttatgcttcaaggaaataccaaa
ccaaaggatcgcctcgcaatggtgaactcgtttaatcagggggataaaaatcttttcctc
atctccctaaaagcgggtggtactggattaaacttaaccggtgccgacatggtcatcctg
gttgacctttggtggaatccggcggttgaggatcaggcgaccgcccgagcgcaccgaatc
ggtcagaaaaaagaagtcgacgttttccgcctcatcactaacgggacaatcgaagaacaa
atttacaaactgcaagaaaagaagcgcaattttgtggaccaagtccttagtggcacccag
aataaggggtcgctgacggaggatgaagttcgtttgatattgggcattgattag
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