Secundilactobacillus malefermentans: FGL90_04915
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Entry
FGL90_04915 CDS
T06836
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lmae
Secundilactobacillus malefermentans
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_04915 (addA)
Enzymes [BR:
lmae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGL90_04915 (addA)
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FGL90_04915 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PDDEXK_1
DEAD
ResIII
AAA_30
AAA_16
BTB
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QEA31576
LinkDB
All DBs
Position
1023174..1026932
Genome browser
AA seq
1252 aa
AA seq
DB search
MADINYTKSQQQVIDTRKTNLLVSASAGSGKTRVLVDRVIKRVTEEGVGIDQLLIVTFTK
AAAKEMKERIRKSLEKEINHAEGEKRQRLMTQLSLLPVANISTLDAFCQQLIEHYYYIIN
LDPVFRLLADRTEGILLRDQVWQDVREDLYGNDEDGLFRQLTVNFSNDRNDDGLTELVNK
VYFYANSKPNPTEWLAQLAQPYDIGGSLNDSDIYQKKILPLVSDRLTEAIKGFKHVIALG
IEMAYPKIVERSQADIERLESVKTQLPFLKWNELIETLFVARKAAPQVSTKDEMHDQKKV
VQESWKLTWQPIDDLKATYFALNESRTTEVMQQSHQIVSTLAKTVQAFSEAYQTEKLRQH
MLDFSDLEHFALEILQSETDQGRAVRKQLRNQYTEIMVDEYQDTNELQESILQTITKHDP
GNLFMVGDVKQSIYRFRLADPSLFLNKFKRFKEHDEEGTNIELAENFRSVKNVDDFTNLI
FTQLMDPQLGEMTYTGASKLVYGATYYPADYQPGTELLIYESQKQEKHQDEESTDEEPVD
DAFQIDGKAEGQITMVGQRIQELIANKTPIFDRETGKLRPVEYRDIALLTPTKGNNLVIT
ELFSRLNIPVLVNDAQNYFKTTEVQIMMALLSIIDNPYQDIPLVAILRSPIVGLDENQLA
YLRITDKTGDYFQAVLRFHDTYQSDNSYGDVIYPKIKRFLEQLQLFKNVAKQNQLVTLIW
RIYQETGFLDYVAAMPAGKQRQANLHALYERAAVYEQSNFKGLFQFVQFIQRMQNEDEDL
SEAPTQVSDNVVRVMTIHGSKGLEFPVVFLMDMSHKFNMQDTMGDAVLNDKLGIGITYFD
EKHRAKFDSLQKMVASDATRQASLAEEMRKLYVALTRAEQQLFIVGAVDDHEKTITSWEN
AQQSNQLVLDMNQRLAAKNNLTWIGMCLIRHPKFDQALRVAEGNPLFTDLNGDETKFSIR
FVTPADLQQIGSKTAPLTGEEWLKQLESQSKEADLTDVNVDEIDQIMNFSYPDQVATRTT
AYQSVSEVKRLFNDPDSMEMGQFSKDWDKAGSANRYVSKEFGRPKFLQTERKPVPTEIGT
ATHLLLQEIDLTQPITSARIAELIQQLVRGGVISESVASQINQQSILNFFENSQLGKLLL
ENPDEVKREQPFSLLLSANKLFNEIVDGDAKVLIHGIMDGYVTLDDEVILFDYKTDYVSM
KDHEASLLKIEDRYRGQVNLYGEALRDILRRPVTHKYLYLLSSGDLVEIRDD
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcagatataaattacactaaaagtcagcagcaagtgattgatacgcgaaagactaat
ttgcttgtatcggcttccgcgggctcaggaaaaacacgagtcttggtcgatcgggtgatc
aaacgcgtgacggaagaaggggttggcattgatcagctcttaattgtgaccttcacgaag
gccgctgccaaagagatgaaggagcgaattcgaaaatcactcgaaaaagaaattaatcat
gctgaaggtgaaaagcgccaacgattaatgacccaattaagtttattgccggtcgctaat
atcagtacgctcgatgctttttgtcagcaattaattgagcattactactatattattaat
ttagatcctgttttcaggctgttggcggatagaactgagggcattttactgcgggaccag
gtttggcaagatgtacgtgaagacttgtacggtaatgacgaggacggattattccgtcaa
ctgaccgttaacttttcaaatgatagaaatgatgatggtctcaccgagttagttaataag
gtttatttttacgcaaattcgaagccaaatccgactgagtggttagcccagttagcgcaa
ccctacgatattggcgggtcattaaacgatagtgatatttatcaaaagaaaatattgcca
ttagtgagtgaccgcttaaccgaagctataaaaggttttaaacatgttattgcacttggc
atcgaaatggcttatccaaaaattgttgagcgtagtcaggcggatattgaacgacttgag
tcagtcaaaacgcaattaccattcttaaagtggaatgagttaatagagacactttttgta
gcaagaaaagcggcaccacaagtctcaacaaaggatgaaatgcatgatcaaaagaaggtc
gtacaggagagttggaaattaacctggcaaccaattgatgacttaaaggcgacctacttt
gccttaaatgaaagtcgaacgaccgaagtgatgcagcaaagtcatcaaattgtctcgacg
cttgccaaaacggtacaagcctttagtgaggcataccaaacagaaaaattgcggcaacac
atgcttgattttagtgacttagagcattttgcattggaaatattgcagtcagaaactgat
cagggacgggctgttcgcaagcaattacgtaatcaatacacggaaatcatggttgatgaa
tatcaggatacgaatgagctgcaagaatcaattctgcagacaattacgaagcatgaccct
ggtaatttattcatggtgggcgatgtgaagcagtcgatttaccgtttccgactggcagat
ccgagcttattcctcaacaagtttaagcggtttaaggaacatgatgaagaaggaaccaac
attgaacttgcagaaaactttcgctctgtcaaaaatgtcgatgacttcaccaatctcatt
tttacgcagttaatggatccgcaactaggagaaatgacctatacgggggcgtcaaagctc
gtgtatggtgccacctactatccggctgattatcaaccagggacggagcttttaatttac
gagagccaaaagcaggaaaaacatcaggatgaggaatcaacggatgaagaaccagttgat
gacgcttttcaaattgatggcaaagcggaaggccaaattacaatggtgggtcaacgaatt
caagagctgatagcaaataaaacaccaatatttgaccgagagactggtaaattaagacct
gttgagtatcgtgatattgcgttactgaccccaacgaaggggaacaatttggtcattact
gaactcttttcaagattgaatattcctgtgctggttaatgatgcccaaaattactttaag
acgactgaagttcaaattatgatggcgttattaagtattatcgataatccctatcaggac
attccactggtagctattttacggtcaccaattgttgggttggatgaaaatcagttggct
tatttgcgcattaccgataagacgggggactacttccaagcagttttaagatttcatgat
acgtaccaatctgataattcgtacggggatgttatttatcccaaaattaagcgttttttg
gaacagttacagttgtttaagaacgttgccaagcaaaatcaactggttacgctcatttgg
cgaatttaccaggaaacgggcttcttagattatgttgcggcgatgccagcgggaaaacag
cggcaggcaaatctgcatgccttatacgaacgggcagccgtgtatgaacaaagtaacttt
aaaggcctctttcagtttgtccagtttattcagcggatgcaaaatgaggacgaagaccta
tccgaggcaccaactcaggtgagtgacaacgtggttcgggtgatgaccattcatggaagc
aaaggactcgaattcccggttgtctttttgatggacatgagccacaagtttaatatgcag
gatacgatgggcgatgccgtcctgaatgataagctcggcattggcatcacctactttgac
gaaaagcatcgggccaagtttgatagtctccaaaaaatggtggcgagtgatgcaacgcgc
caggccagcttggctgaagaaatgcgaaagctatatgttgccctaacgcgagcagagcag
cagcttttcattgtgggtgcggtcgatgatcacgaaaagacgattacgtcttgggaaaat
gcacagcaaagtaatcagttggtgctagatatgaatcaacgactagccgccaagaataac
ttaacgtggattggcatgtgcctgattcgccatcctaaatttgatcaggcactccgagtt
gccgagggaaaccctttatttacagacttaaacggggatgaaacaaaattttcaattcga
ttcgtcaccccagcagatcttcagcaaatcgggtcaaagactgctcccttaactggtgag
gaatggttaaaacagctagagtcacaatctaaggaagctgatttaacagatgtgaacgtg
gatgaaattgatcaaattatgaatttcagctatccggatcaagtggccaccagaacgact
gcttatcagtcagtctcagaagttaagcgcctctttaatgatccagactcaatggaaatg
ggacaattcagtaaagattgggataaagcaggtagtgctaaccgttatgtttcgaaagaa
tttggacgaccgaagtttttgcaaacggaaagaaaaccagttccaacggaaattggtacg
gcaacccacttgctgcttcaagaaattgatttgacccaacccattacgtccgcccgcatt
gccgaattaattcaacaattggttagaggtggcgttatttccgaatctgttgcttcacag
attaaccaacagagtattcttaacttctttgaaaacagtcagctagggaagctccttttg
gaaaatccggacgaagttaagcgagaacagccattttcactcctactttcagctaataag
ctgtttaatgagattgtggatggggatgctaaagtgcttattcacgggattatggatggc
tatgtgacactggatgatgaggtaatcctgtttgactacaagaccgactatgtatcgatg
aaggatcatgaggctagtttattgaagattgaagaccgatatcgtgggcaagttaatttg
tacggtgaggcccttcgagacattttgaggcgccccgttacgcacaaatatttatactta
ttgtcgagcggtgatttagttgaaataagggatgactag
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