Secundilactobacillus malefermentans: FGL90_07590
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Entry
FGL90_07590 CDS
T06836
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lmae
Secundilactobacillus malefermentans
Pathway
lmae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FGL90_07590 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_07590 (uvrB)
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGL90_07590 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGL90_07590 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_7
UvrD-helicase
TrwB_AAD_bind
AAA
T2SSE
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEA32055
LinkDB
All DBs
Position
1565389..1567389
Genome browser
AA seq
666 aa
AA seq
DB search
MIEREDNREFNLVSKYQPTGDQPTAISELTNGIKTGKKEQILMGATGTGKTFTISNVIKN
VNKPTLVLSHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSSIFGLGDPTEYKNHAVSLRVGQQIERNDLMRK
LVDIQFDRNDIDFQRGRFRVHGDVVEIFPASRDERALRVEFFGDEIDRIREVDSLTGEVV
GDRDHVVIFPATHFMTNEDTMGRAIEGIEAELKDRLAYFEKEGKLLEAERLKQRTTYDIE
MLKEMGYTNGVENYSRFMDGRKPGEPPYTLLDFFPDDFLIVVDESHVTMPQIGGMYKGDR
SRKQQLIDYGFRLPSALDNRPLTREEFETHVNQIVYMSATPGPYEEDRTTDVVEQIIRPT
GLLDPKVEVRPIMGQMDDLVGEIHKRMDADERVLVTTLTKKMAEDLTDYLKDLGIKVAYL
HSDIKTLERTEIIRDLRLGKYDVLVGINLLREGIDVPEVSLVTILDADKEGFLRNERSLI
QTMGRAARNEHGKVIMYADSVTDSMQRAIDETVRRRTIQEKYNEEHHITPKTIKKDIREL
ISVTKPNDKSGEKDDFLETDFEEMTKKQQDAMLAQLEGQMRKAAKALDFENAANLRDTIL
ELKAQQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacgtgaagataatcgtgaatttaatttagtttcaaagtatcaaccaaccggt
gaccaaccgacggccatttctgaactaacaaacggaataaaaactggcaaaaaagaacaa
attttgatgggtgccactggaactgggaaaaccttcacgatttctaacgttatcaagaac
gtcaataaacccactttggttttatcgcataataagacgctagcaggacagctttatggt
gaattcaaggaattttttccagataatgcggtggaatattttgtgagttattacgactat
taccaaccagaagcctacgttccttcgagtgatacttatattgaaaaagactcatcgatt
aatgatgagattgataaactacgacattccgcaactagttcgttgctagaacgaaacgat
gttatcgttgtcgcatctgtttcctcgatttttggattaggagatcccactgaatataag
aatcacgccgtttcgctacgtgtgggtcaacagattgaacgaaacgatttgatgcgtaaa
ttggttgatatccaatttgatcgaaacgatatcgattttcaacgtggacgttttcgagtt
catggggatgttgtcgaaatttttccagcttcgagggatgaacgagccttaagagttgaa
ttttttggtgacgaaatcgacagaattcgtgaggttgattctttaaccggcgaagttgtc
ggtgatagagatcacgttgtcattttcccggccactcattttatgacgaatgaggatacg
atgggacgagcaattgagggaattgaagcagagctaaaggatcggcttgcctattttgaa
aaagagggtaaattacttgaggcggaacgtctgaagcaacggacaacctatgatattgaa
atgctcaaggaaatgggttataccaacggggttgaaaattattcaagattcatggatggt
cgaaaaccgggtgaaccaccttacacactactggactttttccctgacgactttttaatt
gtggttgatgagtctcacgtgacaatgccccaaattggtgggatgtataagggtgatcgt
tctcgtaagcaacaactgattgattacggatttagactgccaagtgcgttagataaccga
ccactgacgcgtgaggagtttgaaactcacgtgaatcagattgtttatatgtcagcaact
cctggcccttatgaagaagaccgaacaactgatgtggtggagcaaattattcgaccaacg
gggttgcttgatcctaaagttgaagtccggccaattatgggtcaaatggatgatttagtt
ggtgaaattcataagcgaatggatgctgacgagcgagttcttgtcaccactttgactaaa
aaaatggcggaagatttaactgattatttgaaggacttagggattaaggttgcctatttg
catagtgatattaagaccttagagcgaactgaaattattcgtgatctgcgacttggtaag
tatgacgtcctcgttggaattaatttactacgagagggaattgacgtgcctgaagtttca
ttagtcacaattcttgatgctgataaggaagggttccttcgtaatgaacgttccttgatt
caaacgatggggcgggctgcaagaaatgaacacggtaaagttattatgtatgccgattca
gtgacggattcgatgcaacgggcgattgatgaaacggttcgacgacgtacaattcaagaa
aagtataacgaggaacatcacattacccccaagaccatcaagaaggacattcgtgaactt
atttcggttactaaaccaaatgacaaatcaggggagaaggatgatttcctcgaaactgat
tttgaagaaatgacgaaaaaacaacaagacgcaatgttagcacagctagagggtcaaatg
cgaaaagcagctaaggctttagatttcgaaaatgctgcaaatttacgtgacacaattctg
gaactaaaagcacagcagtaa
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