Secundilactobacillus malefermentans: FGL90_09025
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Entry
FGL90_09025 CDS
T06836
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lmae
Secundilactobacillus malefermentans
Pathway
lmae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGL90_09025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_09025
Enzymes [BR:
lmae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FGL90_09025
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FGL90_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QEA32302
LinkDB
All DBs
Position
1838290..1839201
Genome browser
AA seq
303 aa
AA seq
DB search
MSKLLLGSHVSMKAPKMFLGSVEEALSYGENTFMIYTGAPQNTRRKPIEELNIAAGKELA
EKNSISPLVIHAPYVVNLGNTIKPENYKFAVTFLKEEIARADALGATQIVLHPGAHVGAG
AEAAIAQIAKGLNEVIQPTQKVQIALETMSGKGTEVGITFEQLGSIIDQVEDNDKLSVCF
DTCHTSDAGYDIKNDFDGVLDEFDDVIGLDRLKVVHLNDSKNERGSHKDRHEVIGLGTLG
FDVLNAVAHSPRLADVPKIMETPTVGPDKKHQLSPHAYEVSMLKAEKFNDNLMSDILNQA
PIN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattacttttaggatcacacgttagtatgaaagcacccaaaatgtttttgggt
tcagtcgaagaagcattaagttatggagaaaatacgttcatgatttataccggcgcaccg
caaaatactagacgtaaaccaattgaagagttgaatatagcagcaggtaaagaattagca
gaaaaaaatagtatttcaccactcgttatccacgcgccatacgtcgttaacttgggaaat
actattaaacctgaaaattataaatttgcggttacattcttaaaggaagaaattgcccgt
gccgatgctctaggtgccacacaaattgtgttgcacccaggcgcacacgttggagcaggt
gctgaagcagctatcgcacaaatcgcaaaagggctgaatgaagtgattcaacctactcaa
aaagtccaaattgcgctcgaaacaatgtctggcaagggtactgaagttggcattaccttt
gaacaattagggtcgattattgaccaggtcgaggataatgataagctatctgtttgtttt
gacacttgtcacactagtgatgctggttacgatattaaaaatgacttcgatggtgtttta
gacgagtttgatgacgtcattggacttgatcgacttaaagtggtccatttaaatgattcc
aaaaatgaacgaggtagccataaagaccgtcatgaagtcattggattaggaacattaggg
tttgatgtattaaatgctgttgcgcattctccaaggcttgctgatgtccctaaaatcatg
gagacaccaactgtaggcccggacaaaaagcatcaactgtcaccacacgcatatgaagtc
agcatgcttaaagctgaaaagttcaatgacaacctaatgtcagatattttaaatcaagcg
cccattaattag
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