Secundilactobacillus malefermentans: FGL90_09115
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Entry
FGL90_09115 CDS
T06836
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmae
Secundilactobacillus malefermentans
Pathway
lmae03030
DNA replication
lmae03430
Mismatch repair
lmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGL90_09115 (dnaE)
03430 Mismatch repair
FGL90_09115 (dnaE)
03440 Homologous recombination
FGL90_09115 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmae03032
]
FGL90_09115 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmae03400
]
FGL90_09115 (dnaE)
Enzymes [BR:
lmae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGL90_09115 (dnaE)
DNA replication proteins [BR:
lmae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGL90_09115 (dnaE)
DNA repair and recombination proteins [BR:
lmae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGL90_09115 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
PfkB
HROB
Motif
Other DBs
NCBI-ProteinID:
QEA32320
LinkDB
All DBs
Position
1857502..1860855
Genome browser
AA seq
1117 aa
AA seq
DB search
MSFVPLQVTSTFSLLQSTTKIDELVTTAKERGYSAIALTDNQIMYGAVDFYNACLKQGIK
PLIGLKLTFQGVTDPSQTYSVILIAKNNEGYQNLMVISTLINTSEAALTFNKIKDYLTGL
FYIFPNDSELTALILNKDKEGLQKLFEILKGAANPADIYIGIDVTQSVAYRELVYKIGTD
YKVSLVALPQVNYLNATDHFSIEVLRAIKDGTTITNIGELMKKLGTHWLKPAEEFESSFR
DANLLEAAQNTEKIAAQSQIELKFQQPKLPQFKTDDGSSSFDYLRSKCITGLHNRLTHAP
HTATDEAYKKRLEYELSVINKMGFNDYFLIIWDVIRFAHQTGITTGPGRGSAAGSLVAYV
LNITDVDPLEYDLLFERFLNEERAQMPDIDLDIPDNRREEVLEYVHQKYGHNKVAQIITF
GTLAAKQAIRDVGRVFGLSTPELSEWSHAIPSVLHVSLTEALDQSQKLKNMISDSSTNKM
LYETACKLEGLPRHYSTHAAGIVLSDNPLVDLVPLQNGSESMMMTQYSKDIVESVGLLKM
DFLGLRNLSIMADALATIKRQGDAHFKVEDVNLNDPQTLAIFARGDTNGVFQFESNGIKG
VLRRLQPNNFELVAAVNALYRPGPMENIDTFIARKNGKEPVSYPDPSLAPILKHTYGIIV
YQEQVMQVASKMGGFSLGQADLLRRAMSKKKKATMDAMKKRFLNGASKLGYSEKVAEQTF
NYIDRFANYGFNRSHAVAYSKMAFEMAYLKVHYKTAFYAALLNSVMNNPAKTKVYLMEAK
QHEVDVVAPDINNSGATFQVSKETIQFGLASIKGVRKDFLRDLLEERRSSGRFKNFYEFL
KRIGNKWQKQDLIENLIYAGVFDSFDANRAELVTALPEFLSSLELSGGSMELFEELAPKV
RPVPDFSLSEKLEKEEAVLGAYLSGHPVEEYRGLMKSLKSTPVSDLSLNSKCVVLVYIKR
IKVIRTKRGDQMAFATVEDLTGEISVTIFPNLYRTIADWFEKEQVVVVRGKVEKQRDVQI
VADQIQLASTIKVDETPTQPAGRWFLRIDADHDKPEVHQAILKVLKKYQGEFPVIFYRPE
GDQTQLLNKNLWLSNSAEIQPELISILGEKNVVFQKK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtcccattacaggttacgagtacgtttagtttgctacaaagcaccaccaaa
atcgacgagctagtaaccaccgctaaagagcggggatacagcgcaattgcgttgactgac
aatcaaatcatgtatggcgctgtggatttttataatgcgtgcttgaaacaagggataaag
ccactcatcggtcttaaactaacatttcaaggcgtcacggatcctagtcaaacatacagc
gtaattttaattgctaaaaataacgagggctatcaaaatttgatggtcatttcgacttta
ataaataccagtgaggctgccttaacctttaataaaatcaaagattatttaaccggcctt
ttctacatttttccaaatgattcagagctaacggccctcatccttaataaggacaaagag
ggattacagaaactatttgaaatactaaagggtgctgcaaatcccgcagatatttatatt
ggcatcgacgtcactcagtcggtggcttaccgcgaactggtttacaaaattgggacagat
tacaaggtgagtttggttgcattacctcaagtgaactatctgaatgcgacggatcatttc
agtattgaagtgttaagggcaatcaaggatgggacgaccatcacgaatatcggtgagtta
atgaaaaagctaggaactcattggttaaagcctgccgaagagtttgaaagttcctttagg
gatgccaacttgcttgaagcggctcagaatacagaaaaaatagcggcgcaaagtcagatt
gaattgaaatttcaacagcctaagttaccgcaattcaaaacggatgatgggtctagtagt
ttcgactaccttagatcaaagtgtattaccggtttacacaaccgattgacccacgccccc
cacacggcgacggacgaggcttacaaaaaaaggctggaatacgaattatcagtaatcaat
aaaatgggattcaatgattacttcctaattatttgggatgtgattcgatttgctcatcaa
actggtatcacgactggacctggtcgaggttcagctgcgggatcgctggtcgcctatgtt
ttaaacattacggatgttgatccgcttgagtatgatctcctatttgagcggttcttaaat
gaagagcgggcgcaaatgccagatattgatttggatattcctgataatcggcgagaagaa
gttttggaatacgttcatcaaaagtacggacacaataaagttgcccaaattattaccttt
ggcacgctggcggcaaaacaggcaattcgggatgttggccgtgtgtttggcctctcaaca
ccggaactttcagagtggagtcatgcgattccaagcgttttgcacgttagtttgacagag
gcactagaccagtcacaaaaattaaaaaatatgattagtgacagtagcacgaacaaaatg
ctttacgaaactgcctgcaagcttgaaggattaccccggcactactcaacccacgctgct
ggaattgttttgagtgataatccattagtggatttagttcccctccaaaatggatctgaa
tccatgatgatgacgcaatactcaaaggacattgttgaaagtgttgggcttcttaaaatg
gattttcttggattaagaaatttgtcaattatggccgatgccttagcaacaattaagcgg
cagggggatgcgcacttcaaggtggaggatgttaatttaaatgatccacaaactttggca
atctttgctcgtggagatacgaatggcgtctttcaatttgaatcaaacgggattaagggt
gttttgcggcggttgcaacccaataactttgaactggtcgcagccgtcaatgcgctttac
cgaccagggccaatggaaaatattgatacgtttattgcccgaaagaacggaaaagaaccg
gttagctatccggatccttcactggccccaattctaaaacacacctacggaatcattgtt
tatcaggagcaagtgatgcaggttgcttctaaaatgggtggctttagtcttggacaagcc
gatttactgcggcgagcgatgagtaaaaagaaaaaggccacaatggacgccatgaaaaaa
cgctttttaaatggcgcctcaaaattgggttactccgaaaaagttgctgagcaaacgttt
aactatattgatcggtttgccaattacgggtttaatcgatcgcatgcggtcgcgtacagt
aagatggcgttcgagatggcctacttgaaggttcattacaaaacggccttctatgctgcc
ttgttgaattccgtgatgaataatccggctaaaacgaaggtttatttgatggaagcaaag
cagcatgaagttgacgttgtggcgcccgatattaataacagtggcgcaacttttcaggtt
tccaaagaaacgattcaatttggattagcgtcgattaagggggttcgaaaggactttcta
cgtgatctattagaggaacggcgcagtagtggccgttttaagaatttttatgaatttttg
aaacgaattggcaacaaatggcaaaagcaagatttaattgaaaatttaatttacgcaggc
gtctttgattcgtttgacgcaaatcgagctgagctggtgacggcactccctgaattttta
agcagtctcgaattaagtggtggcagcatggaattgttcgaagagcttgcaccaaaagtg
cggccagttcccgatttttcgctgtctgaaaagttggaaaaggaggaggccgtgttgggc
gcctacctttccggtcacccggtggaagagtatcggggcttgatgaaatcgctcaagtcg
acaccagttagtgatttaagtttaaattccaaatgtgttgtattggtgtacatcaagcgg
attaaggtcatccggaccaaacgaggagatcaaatggcgtttgcaacggtggaggatctg
actggtgaaattagtgtgactatttttcccaacttgtatcgcaccattgcggactggttt
gaaaaggaacaggttgtcgtcgttagggggaaagttgaaaagcaacgggatgttcaaatt
gttgcggatcaaattcaacttgctagcacgattaaggttgatgagacgcccacccagcca
gcgggcaggtggttcctcaggattgatgctgatcacgacaaacccgaagttcatcaggca
attctcaaggtgttaaagaaataccaaggcgaatttccggtcattttttatcgtcctgaa
ggggatcaaacccaattgctgaataaaaatctgtggttatcaaattcagctgaaattcag
ccagaattaatttcaatattaggcgaaaaaaatgttgtctttcagaaaaaataa
DBGET
integrated database retrieval system
