Longinema margulisiae: BREVNS_0861
Help
Entry
BREVNS_0861 CDS
T11945
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
Organism
lmag Longinema margulisiae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
YqgF
S1_RRP5
HHH_7
T2SSK
HHH
DUF2187
OB_PDCD11
UvsW-1
Motif
Other DBs
NCBI-ProteinID:
QJR21611
LinkDB
All DBs
Position
complement(836994..839279)
Genome browser
AA seq
761 aa
AA seq
DB search
MEFTKEWIDSLTIDPVAIIRKISEQLSIPVHQVQATVNLLKEGNTIPFISRYRKEVTGSL
NEVQVRDISHQLTYLENLEERKLEVVRSIFSQGKLTEDLFVNIHKCQTLTELEDLYAPYK
KKKKTRAMIAMEKGLAPLADYMEQQPDVEKEAEKYLNPELGVNTVEEALQGAMDIIAERV
AQDMDRRAVVREYVQKTGKFEVKGLKEADVSVYKMYYDYTKSLSDLKAHHVLAINRGERE
GELEASLVFDMDEGLAKLLHTYTIANSYHRAAIEDGYKRLLVPSVLREIRTQLTQQAEHH
GISVFAENLKHLLMQPPIKRTRVLAIDTGIRTGSKCVALDENGKYLGHFVIYQHQPDRAK
ALLVDAIQKYQSELIAIGNGTGSHEVQFLVSEMISEYNLPIQFTVVDEDGASVYSASEIA
IEEFPDLDLTVRGAISIGRRLQDPLAELVKIEPKALGVGLYQHDVDQKELATKLDETVES
VVNQVGVNINTASAALLRYVSGVSSILAKNIIEYRNARGAFRSREELKKVPGFGPKTFEQ
AAGFLKVPESEEYLDNTWVHPENYPLAREILSYMREKKELTKEVIASLKAKYGVGDTTIQ
DIIQELRKPNRDPREDYPQPILQKGVVQFEDLKVGMKVKGKVKNVVDFGAFVDIGIKETA
LVHLSQLSDSFIHHPSEVLKVGDIREFTIVEIDVLRKRIGLSLKSDPFAVTKPKPQNRDE
KRGGDSGKTGGNRVSSRPAERKSSVASPTLGDFLKNVKFDK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaccaaagaatggattgattctctcacgattgatccggtagcgattatccgc
aaaatttcagagcagctcagtattcctgtgcatcaggtccaggcaacggtgaatctactc
aaggaagggaacaccattccctttatttcccgttatcgaaaggaagtaacggggtctctc
aatgaagtccaggtgagagacatctctcatcagttaacctatcttgaaaaccttgaagaa
cgtaagttagaggtagtgcgaagtatcttctctcaggggaagctcacggaggatctcttt
gtcaatattcataaatgccagacgctgacggagcttgaggatctctacgctccctataag
aagaaaaagaaaaccagggcgatgattgccatggaaaaggggcttgcaccgcttgctgac
tacatggagcaacaaccggatgtggagaaggaggctgaaaagtatcttaatcccgaactg
ggggtcaatactgtggaggaagcccttcagggagcgatggatatcattgccgaacgtgtg
gcccaggatatggacagacgtgctgtggtgagagagtatgtgcagaaaacaggcaaattt
gaggtcaagggactcaaggaagccgatgtgagtgtgtacaagatgtactatgactatacc
aagtctctttctgacctgaaagcccatcatgtattggccatcaatcgaggagagcgagag
ggtgagcttgaggcttctcttgtttttgatatggatgagggacttgccaagcttcttcat
acttatactatagccaatagttatcacagggcggctattgaggatgggtacaagaggctt
cttgtgccttctgtactgcgagaaatccgcacccagcttacccagcaggcggaacaccat
ggcatcagtgtgtttgccgaaaatctcaaacaccttctcatgcagccacctatcaaacgg
acaagggtgcttgcgattgataccggtattcgtacgggaagtaagtgtgtggctcttgat
gagaatggcaaataccttgggcattttgttatctatcagcatcagccagatagagccaaa
gcccttcttgtggatgcgattcagaagtaccagtctgaacttatagccattgggaatgga
accggctcacacgaggttcagtttttggtttctgagatgatcagtgagtataatctccct
attcagtttacggtggtggatgaggatggggcttcggtgtattcggcttcggaaatagcc
attgaggagtttcctgatcttgatctgacggtacgtggggctatttctattggccgacga
ttgcaggatccccttgctgaacttgtcaagattgaacccaaagcgttaggggtaggactc
tatcaacacgatgtagatcagaaggagttagccaccaaacttgatgagacagtggaatca
gtagtgaaccaggtgggggtgaatatcaatacagcttcagcggctcttttgcgttatgta
tcaggagtaagttccattcttgccaaaaatattatcgaatatcgtaatgcccgtggagcc
tttcgaagtcgtgaagaactcaagaaagttcctggttttggtcccaaaacctttgaacag
gcggcagggtttctcaaggtacctgagtcggaggagtatcttgataacacgtgggtccat
ccagaaaattaccccttggcgagagagattctttcctatatgagggagaaaaaggagctg
acgaaagaggtgattgcttctctcaaggcgaagtatggggtgggtgataccacgattcag
gatatcattcaggagcttcgaaaaccaaaccgtgatccacgagaggattatccacagcct
attcttcaaaaaggggtggttcagtttgaggatctcaaggtgggaatgaaggtaaaaggc
aaggtaaagaatgtggtggattttggggcttttgtggatattgggatcaaggaaacggcg
cttgttcatctctcccagttgagtgattcgtttattcaccatccttcagaggtactcaag
gtgggggatatacgggaattcaccattgtggagattgatgttttgcggaaacgaattggg
ctttctctcaagagtgatccctttgcggtgacgaaaccaaaaccgcaaaatcgagacgag
aaacggggtggggattctggaaaaacgggtggaaatcgggtgagtagcaggccggctgag
cgaaaatcttcggtagcgagtcctacgcttggagattttctcaaaaatgtcaaatttgac
aaatag
DBGET
integrated database retrieval system
