Candidatus Lucifugimonas marina: GKN94_00330
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Entry
GKN94_00330 CDS
T10105
Name
(GenBank) YjhG/YagF family D-xylonate dehydratase
KO
K22396
xylonate dehydratase [EC:
4.2.1.82
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj00040
Pentose and glucuronate interconversions
lmaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GKN94_00330
Enzymes [BR:
lmaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.82 xylonate dehydratase
GKN94_00330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
DUF7393
Motif
Other DBs
NCBI-ProteinID:
WFG34194
LinkDB
All DBs
Position
72342..74363
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AA seq
673 aa
AA seq
DB search
MTTRVTPGNDTAEVSIADVLGTGADPATREIMTHADGPKGTVPFTAEFLIEEPSGNHFGM
TQNAGMGWNPSELMRKQFIILSTVGGVKEEDGSPVALGLHTGHFELVDMVSAAAKELKDL
KSVPFAAFCSDPCDGRTQGTTGMLDSLPYRNDAAQVFRRIARSLPTVRGVLGVASCDKGL
PAMMMALAGLHNQPTVVVPGGTTLKPHVGEDTGQIQSIGARFAQGEVTLEYAQDVGCRSC
ASPGGGCQFLGTAGTSQVVSEALGLAITHAALSPSGTPAWHDIARRSARALVMMEKSGVT
SQDILTDAAFENAMAVHAACGGSTNLLLHMPAIAHAAGRRRMTVDDWNRVNLEVPRLVDV
LPNGPVGHPTTQLYAAGGVPEVMLHLRKLGLIDTSVLTATGQTLEENLNWWEDSERRHDV
RKYLKEVDGVDPDNVIMSPENASKKNLTSTVTFPMGNIAPEGSVIKSTAIDPSVVDDDNV
YRKLGPARVFRSERAAMGAIKSRDEDHKIKAGDIMIVTCGGPLGTGMEEVYQLTAALKHL
SYGKQVALITDARFSGVSTGACIGHVGPEALAGGPIGRVEDGDLIEIIVDRKNLSGSINL
VGSNGENKGADWGTAELEKRGEPTDLAPHPQLPDDSRLWAALQSASGGTWGGCVFDVDSI
VETIEAGKKALGK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcgtgtcacccctggaaacgacactgcagaagtttcgatagcagatgtgctc
ggaaccggagcagatcccgccactcgtgaaatcatgactcacgcagatggtccaaagggc
acggtgccgttcactgctgaatttctgatcgaagaacctagtggtaaccacttcggcatg
acccagaacgccggaatgggttggaacccttccgagcttatgcgtaagcagttcatcatt
ctttcgaccgtcggtggtgtgaaagaggaagacggatcgcctgttgcattgggattgcac
acaggtcacttcgaactggtcgacatggtttcggcagccgcaaaagaactaaaggatctg
aaatcggttccgtttgcggcattctgttccgatccttgtgacggtcgaactcagggcaca
accggaatgctcgactctctgccataccgaaacgacgccgcacaggtgttcaggcgtatt
gcccgttcgcttccaacggtacgaggtgtactgggtgttgcttcgtgtgacaaaggcctg
ccagccatgatgatggctttggcgggattgcataaccagccaactgtagttgtgccgggt
ggaacgactctcaagccgcacgttggtgaagacaccggtcagattcagtcgattggtgct
cgatttgctcaaggtgaagtaacgcttgaatacgcacaagatgtcggctgtcggtcatgt
gcttcaccgggtggtggttgtcagttcctcggcaccgccggcacgtctcaggtcgtctca
gaggcgcttggtctggcaattacgcacgccgcactctctccaagtggtacgcccgcttgg
cacgacatcgctcgacgctcggcacgtgctctcgtgatgatggagaagagcggagttact
tctcaggatattctcaccgacgctgcattcgagaacgctatggctgttcacgccgcttgt
ggtggttcgacaaacctcttgctgcacatgccagcaattgcccacgcagctggtcgacgt
cgcatgacagtcgatgactggaaccgagtaaacctcgaagtaccccgtttggtcgatgta
ctgccaaacggaccagttggacacccaactacccagctgtatgctgctggtggtgttccc
gaggtaatgcttcaccttcgaaagctgggtctgatcgacaccagcgttcttaccgcaacg
gggcagactctcgaagagaacttgaactggtgggaagactcagagcgacgacacgacgta
cgcaagtacctcaaggaagttgatggagtcgaccctgacaacgtaatcatgtcaccagag
aacgcctcgaagaagaatctcacaagcacagtaacgttcccgatgggcaacatcgctcct
gaaggttcggtgatcaagagcacggcaatagatccttcagttgttgatgacgacaacgtc
tatcgcaagcttggacctgcccgtgtgttccgttccgagcgcgcagcgatgggtgcgatc
aagtcacgagatgaagatcacaagatcaaggctggcgacatcatgatcgtcacctgcggt
ggtcctctcggaactggaatggaagaggtttaccagctaacggctgcgttgaagcacctt
tcatacggcaagcaggtggcgttaattaccgatgctcgattctcgggcgtttctactggg
gcatgtatcggacacgttgggcctgaggcgttggctggcggtcctatcggccgagttgaa
gacggcgatctaatcgaaattatcgttgatcgtaagaatctttcaggctcgatcaatctc
gttggttccaacggcgaaaacaagggtgccgattggggtaccgccgagctagagaagcgt
ggtgaacccactgatttggctcctcatcctcagcttccggatgattctcggctttgggct
gcactgcagtcggcatcgggcggaacctggggcggctgtgtgttcgatgtcgattcgatt
gttgagactatcgaggccggcaagaaagctctgggtaagtag
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