Candidatus Lucifugimonas marina: GKN94_02055
Help
Entry
GKN94_02055 CDS
T10105
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj03030
DNA replication
lmaj03410
Base excision repair
lmaj03420
Nucleotide excision repair
lmaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKN94_02055 (polA)
03410 Base excision repair
GKN94_02055 (polA)
03420 Nucleotide excision repair
GKN94_02055 (polA)
03440 Homologous recombination
GKN94_02055 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmaj03032
]
GKN94_02055 (polA)
03400 DNA repair and recombination proteins [BR:
lmaj03400
]
GKN94_02055 (polA)
Enzymes [BR:
lmaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKN94_02055 (polA)
DNA replication proteins [BR:
lmaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GKN94_02055 (polA)
DNA repair and recombination proteins [BR:
lmaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GKN94_02055 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKN94_02055 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
MPH2
HHH
Motif
Other DBs
NCBI-ProteinID:
WFG34510
LinkDB
All DBs
Position
complement(443472..446378)
Genome browser
AA seq
968 aa
AA seq
DB search
MTTSKAKTDDQMFLLIDGHAIVFRAWFAMRDHLITASGQNTTGASGFMTMFLKTIREQNP
THIAVTFDTKAPTFRKELFPEYKAQRQEVDPALHEQIPILKEILEPMGVPVYEYEGFEAD
DLIGTLSKQATEQGIKTLILTGDADQLQLVDEDTSLLMYTGFGDMRTYDPAGVADKYDGL
GPEYVAEIKALEGDSSDNIPGVPGVGKKSARAVLTKLGHFPSLFSQLEEVEKIEGLRGAK
RTMNLLEEHRETAATALVLTTIVRDVPVEFDADGSKFGDFDREVVIKKLMEYEMRNVANR
LPKAGSDAPSPSSAPDVESAPGWEPNEAPAITADGQMDMMGEGAPVEALVDPEPPKPLGE
YEVVTDMTGLNTMIDALRAKGEFAFDTETTGLNSMTSDLVGLSFSIKSEHAWYVAVGHTT
DGESVKDQVPFAEGLAALRPIFEDESIKKIAHNANFDMMVLAAAGISVNNLSFDTMIAAA
LCGRRAIGLKQLALELFQAEMTEIKTLIGVGKKQITMAAVPIDQAGPYAAADADFTWRLY
EHFEPEIDEHESRYVNEEIELPLLPVLIEMQRNGMIIDKTALAEMSEQLGADVEQIKQAA
TAVIGGRELNLASNQQVAALLIDELGAPKTRKTKTGYSMDANALEKISETTGLDDRVYQV
ADAVLKFRELTKLKSTYVDALPELVNPQTGRVHTSFNQVGSATGRLSSTDPNVQNIPVRT
ELGRRVRKAFVADAANGWQFLAADYSQIELRILAHLSQEPGLLEAFHKGEDIHAATARAM
YDVQDVNADQRRIAKILNFGVIYGLGPVGVARQTDLTRQQGQEFIDLYFGKYPGIRDYIE
EVKQSARDNGYAQTITGRRRYLPDINAGHPGHRAAAERVSVNMPIQGTAADVIKLAMINI
SNEMKTQKMRSKMSIQVHDELIFEIAPGELMEMQMMVTSMMPAAMNLDVPLLVEAKTGPT
WGDMDSVD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttccaaagctaaaactgacgaccagatgttcctccttatcgacggtcacgca
atcgtgttccgagcgtggttcgccatgcgtgatcatctgatcaccgcttctgggcagaac
acgaccggggcgagtggattcatgacgatgttcttgaagacgattcgagagcaaaacccc
actcacatcgcagtgacgttcgatacgaaggctcccacattccgcaaagaactatttcct
gagtacaaggcgcagcgacaagaagtcgaccctgccctccacgagcagattccgatcctt
aaagaaatcctcgaaccaatgggggtgccggtatacgaatacgaaggattcgaagcagat
gatctgataggaactctttctaagcaggccacggaacagggcatcaaaactctgatcctc
actggtgatgccgaccagctacagctggttgatgaagatacgtctctcctcatgtacacc
ggtttcggcgatatgcgaacgtacgatccagcgggtgtcgccgacaaatacgacgggctc
ggacccgaatacgtagccgagatcaaagccctcgaaggcgattcatccgacaacattcct
ggcgttccgggagtcggaaagaaatcggcacgagccgtactcacgaagctcggccacttt
ccttcgctattcagccaactcgaagaagtcgagaaaatcgaaggtctgcgcggtgccaag
cgcacgatgaatctcttggaagaacatcgcgaaacagctgcaactgcgctcgttctaacc
acaatcgttcgagacgtcccagtcgagttcgatgccgacggttcaaaattcggcgatttc
gaccgcgaagtggttatcaagaaattgatggaatacgagatgcgcaacgtcgccaaccgt
cttcccaaagcaggctctgatgcaccatctccatcgtcggcaccagatgtcgaatcagca
cccggttgggagcctaacgaagctcccgcaatcaccgccgatggacagatggacatgatg
ggagagggtgcaccggttgaggcgctggtcgatcctgaaccaccaaagccactcggcgag
tacgaagttgtgaccgacatgacaggtctcaacactatgatcgacgctttgcgagccaaa
ggtgagtttgcgttcgacaccgagacgaccggtctaaattcgatgacatcagatctggtt
ggtctctcgttctcaatcaaatcggaacatgcctggtacgtagcggtgggccacactacc
gatggcgagagcgtaaaagatcaggttccattcgccgaaggactagctgcccttcgacca
atattcgaagacgaatcaataaagaagatcgcccacaacgccaacttcgacatgatggtg
ctcgctgctgccggtatctccgtgaacaatctgtcgttcgacacgatgatcgccgccgcc
ttatgcggacggcgcgctattggcctaaagcaactcgcacttgagctgttccaagccgaa
atgaccgagatcaagacattgatcggcgtaggcaaaaagcagataacgatggcggcagtt
ccaatcgaccaggcaggtccatacgcagctgccgatgccgatttcacctggcgcttgtac
gagcacttcgagccagaaatcgacgagcatgaatcgcgatatgtaaatgaagaaatcgaa
cttcccttgctgccagtgctcatcgaaatgcagagaaacgggatgatcatcgacaagaca
gcacttgctgaaatgtcggaacaacttggagcggatgtagagcaaatcaaacaagcagcg
acagccgttatcggcggtcgagaactcaatctcgcatcgaatcaacaagtagccgccctg
ctgatcgacgagctcggtgctcccaagactcgtaagaccaaaactggttactcgatggat
gcgaatgcactcgaaaaaatttcggaaactactgggctcgacgaccgtgtttatcaagta
gccgacgctgtcttaaaattccgagaactcacaaagcttaaatcgacttatgtcgacgca
ttgccagagctggtaaatccccaaactggtcgagttcacactagcttcaaccaggtcgga
tcagctacgggtcgactctctagtaccgatccaaacgtgcaaaacattccggttcgcacc
gagcttggtaggcgtgtgagaaaagccttcgttgccgatgctgcaaacggctggcaattc
ttggcagccgactactcgcagatcgaacttcgcatcttggctcacctttcgcaagagccc
ggactgctcgaagcattccacaagggcgaagacatccacgccgcaactgcccgtgcgatg
tacgacgtacaagacgtgaacgccgatcaacgacgaatcgccaagattttgaactttggc
gttatttacggactcgggcctgtcggagtagcacgccagaccgatctaacccggcaacag
gggcaagaatttatcgatctttacttcggaaaatatccgggaattcgagactacatcgag
gaagtaaagcagtcggctcgcgacaacggctatgctcagacgattacgggccgtcggcgt
tacttacccgacataaacgcggggcaccccggccaccgcgccgccgccgaacgagtgtcg
gtgaacatgcctattcagggaactgcagcagacgtgatcaagctggcgatgatcaatatt
tcgaatgagatgaaaactcagaagatgcggtcaaaaatgtcgattcaggtccacgacgaa
ctcatcttcgagatcgctcccggcgagctgatggaaatgcagatgatggtcacatccatg
atgcccgcggctatgaatcttgatgtgcccctcctagtcgaagccaaaaccggcccaact
tggggcgacatggattcagtggattag
DBGET
integrated database retrieval system
