Candidatus Lucifugimonas marina: GKN94_02620
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Entry
GKN94_02620 CDS
T10105
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GKN94_02620 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmaj03400
]
GKN94_02620 (xseB)
Enzymes [BR:
lmaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GKN94_02620 (xseB)
DNA repair and recombination proteins [BR:
lmaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GKN94_02620 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
GvpK
KxDL
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
WFG34621
LinkDB
All DBs
Position
complement(558720..558998)
Genome browser
AA seq
92 aa
AA seq
DB search
MTESTKKPAAKSFESSFSELEEVVRKLETGGLSLDEATKLFENGMKLATKCNEILSSSEL
KITRLQANFAEQMNLVPDSDNVAEDEFDDEDA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcgactaaaaagccagcagcaaaatccttcgaaagttcgttttcagaactc
gaagaagttgtgcgaaaactcgaaaccggtggactatccctcgatgaggcaaccaagctt
ttcgagaacggtatgaagctggcaactaagtgcaacgaaattctctcgtcgtcagaattg
aagatcacacggcttcaggccaacttcgctgagcagatgaacctcgtacccgattccgac
aacgtcgctgaagacgagttcgacgacgaggatgcctaa
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