Candidatus Lucifugimonas marina: GKN94_02625
Help
Entry
GKN94_02625 CDS
T10105
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GKN94_02625 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmaj03400
]
GKN94_02625 (xseA)
Enzymes [BR:
lmaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GKN94_02625 (xseA)
DNA repair and recombination proteins [BR:
lmaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GKN94_02625 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WFG34622
LinkDB
All DBs
Position
complement(559061..560308)
Genome browser
AA seq
415 aa
AA seq
DB search
MTGNYESGQDNSGRQTAYTVSAVADYLKAALESDPRLADLTVVGEVSGYRNPSSGHHYFA
LRDEQSVLRSVMFRSGRGGQFLADGTQVICHGRISMYTARGDLQYYVDQVEPDGVGALQQ
AYEEMRKRLEAEGLFELDRKRPLPELPAKIAVITSPTGAVIQDILNVLTRRYPLAEIILI
PTSVQGEKAAPEIVQAFQALNALDDIDVAIVARGGGSLEDLWSFNEEIVARAIFASNVPV
ISAVGHETDTTIADYVADRRAPTPSAAAEIVAPDVRDLGGYVTGYVARIDDLISRTVRDS
RSQFEMAVDRMNLRVPDTTQPRQRIDDLLTRARLAGQRMVESSKLRLQTVEASLNALGPE
KILGRGYTITRLADGSAATSASQFSSGDKLGVTFADGSVETTVDEVDATAEASDP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtaactacgaatcaggccaagataattcaggacggcaaaccgcctacacagtt
agtgctgttgctgactacctaaaagcagctctcgaatccgacccgcgactggcagatcta
acagtagttggcgaagtttcgggctacagaaacccttcttcagggcaccactacttcgcc
ctccgagacgaacagtcggtacttcgatctgtaatgttccgatcagggcgtggcggtcaa
tttctcgccgatggcactcaagtgatctgccacggcagaatctcgatgtacaccgcacgc
ggcgacctgcagtactacgtcgaccaagtcgaacccgacggtgtcggagctctccagcaa
gcctacgaagagatgcgtaaacgcctcgaagcggaaggcctgttcgagctcgaccgtaag
cgaccgttacctgaacttcccgctaaaattgcggtcatcacgtcgcctaccggtgcggtg
atccaggacatcctgaacgtcctaacccgacgttacccactcgctgagatcattctgatt
ccaacatcagttcaaggtgaaaaggccgctccggaaatagttcaggcattccaagcactc
aatgcactcgacgatatcgacgtcgccatcgttgcccgaggtggtgggtcgctggaagac
ctctggtccttcaacgaagaaatcgtcgccagagcaatatttgccagcaacgttcccgtc
atcagcgcagtcggacatgaaaccgacacaaccatcgccgattacgtagccgaccgacgt
gccccaaccccatcagcagccgcagaaatcgtcgctcccgacgtccgtgatttgggcggt
tacgtaacaggatacgtagctcgaatcgacgacctaatcagccgaacggttcgagactct
cgttcgcaattcgaaatggcggtcgaccgaatgaatcttcgggtgcctgacacaacccag
ccacgacaacgaatcgacgatcttctcacccgcgcccgactcgccggccaacgaatggtc
gaatcatcgaagcttcggctacaaacagtggaagcttctctcaacgcactcggtccagag
aaaattcttggccgtgggtacacgatcacaagactggccgacggaagcgccgcaaccagc
gcatcacagttctccagcggcgacaaactcggtgtgacattcgccgacggatctgtcgaa
acaaccgtcgatgaagtcgatgcaacagccgaagcttctgatccataa
DBGET
integrated database retrieval system
