Candidatus Lucifugimonas marina: GKN94_04040
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Entry
GKN94_04040 CDS
T10105
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj00053
Ascorbate and aldarate metabolism
lmaj00520
Amino sugar and nucleotide sugar metabolism
lmaj01100
Metabolic pathways
lmaj01240
Biosynthesis of cofactors
lmaj01250
Biosynthesis of nucleotide sugars
Module
lmaj_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
GKN94_04040
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
GKN94_04040
Enzymes [BR:
lmaj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
GKN94_04040
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
NmrA
adh_short
KR
ASD1_dom
Gp44_C
Motif
Other DBs
NCBI-ProteinID:
WFG34889
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Position
914610..915578
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AA seq
322 aa
AA seq
DB search
MKIVVTGCAGFIGSRVSSLLTENGHEVRGLDNLNDAYDVRMKDWRVENILTPGGIDWVNG
DITDRDLVIGLIEDFEPDAVVNLAARAGVRQSIDDPWVYYETNVTGTLNLLEACKDAGVT
RFLLASTSSVYGKNQMPFSEDAVIDSLLSPYAASKKAAEDLCRLYNYLFDFDVTIFRFFT
VYGPSGRPDMSVFRFIRWIVEGDTLQLNGDGKQQRDFTHVDDVARGVVAAVDRKPGIETI
NLGSDSPVELNEVIGQIESLTGKTANIENHPFPDTDVMATWANISRARELLDWEPQVELR
QGIATAVDWYMANRDWAKDISL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattgtcgtaacaggttgtgcaggatttatcggttcgcgggtttcgtctttgttg
actgaaaacggtcatgaggttcgtggtctcgacaatttgaacgatgcgtacgatgtccga
atgaaggattggcgtgtcgaaaatattttgacacccggtgggattgactgggtaaatggc
gatattactgaccgagacctcgtaattggactgatcgaagacttcgagcctgatgcggta
gtgaatcttgcggctcgtgcaggagttcgacaatcgatcgatgatccttgggtttactac
gaaacgaacgtcactggcacgttaaatttactggaagcctgtaaggatgcgggagtcact
cgattcttgttggcatctacatcaagcgtttatggtaagaaccagatgccgttttctgaa
gacgcagttatcgattcgttgttatcgccttatgcagcatcgaagaaggcagcggaagac
ctttgccggctgtacaactatctgttcgatttcgatgtaaccatttttagattctttacg
gtctacgggccatcaggtcgacctgatatgagcgtgtttcgattcattcgctggattgtt
gaaggcgataccttgcaattgaatggcgatggcaagcagcagcgagattttactcacgtt
gatgatgtggctcggggtgtggttgctgctgttgataggaagccagggattgagactatt
aatctcggttcagatagtcctgttgaactgaacgaagttatcggtcagatcgaatcgctg
accgggaagacggccaacatcgaaaatcatccattccccgatactgacgtcatggcgacc
tgggcgaatattagtcgagcgagagaattgttggattgggagccgcaggttgaattgcgg
caggggatcgctacggcggtcgattggtacatggcgaatcgtgactgggcgaaggatatt
tcgctgtaa
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