Candidatus Lucifugimonas marina: GKN94_05705
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Entry
GKN94_05705 CDS
T10105
Name
(GenBank) FAD-dependent oxidoreductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj00020
Citrate cycle (TCA cycle)
lmaj00190
Oxidative phosphorylation
lmaj00650
Butanoate metabolism
lmaj00720
Other carbon fixation pathways
lmaj01100
Metabolic pathways
lmaj01110
Biosynthesis of secondary metabolites
lmaj01120
Microbial metabolism in diverse environments
lmaj01200
Carbon metabolism
Module
lmaj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lmaj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lmaj_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GKN94_05705
00650 Butanoate metabolism
GKN94_05705
09102 Energy metabolism
00190 Oxidative phosphorylation
GKN94_05705
00720 Other carbon fixation pathways
GKN94_05705
Enzymes [BR:
lmaj01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GKN94_05705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
DAO
FAD_binding_3
GIDA
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
NAD_binding_7
Thi4
Lycopene_cycl
Pyr_redox_3
GMC_oxred_N
Pyr_redox
OPA3
Motif
Other DBs
NCBI-ProteinID:
WFG35207
LinkDB
All DBs
Position
1265728..1267410
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AA seq
560 aa
AA seq
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MYEHDVLIIGGGLAGLRAAVEVTRAGADVAVISKVHPVRSHSNAAQGGINAPLTDRGDDW
EGHAYDTIKGSDFLADQDAVEVMSSEAGEAVLELERMGVIFSRGEDGKLGTRAFGGQKVA
RTFFVGAITGSAILHVLFEQSLKLGLNVYEEWFVTKLIIEDGVCRGVVAIDLKTGEMHTI
KAKAVIMAAGGAGRVFEPSTNALICTGDGLSLAYQAGVPLMDMEMIQYHPTTLARTGILM
SEAARGEGGYLLNAAGERFMEKTAPDYMELASRDVVSRAEQTEIDEGRGIDGNVLLDLRH
LGREYIEAKLGYLQEVSVEFLGIDMAEQPVPVQPGMHYIMGGIKTDVNGATNVPGLYAAG
ECANVSVHGANRLGANSLLDTVVFGRRSGAHAVEYIKSVGAHSKAEEDLANEKARIQALL
DRPKGERVATIRNDMARGMTKGIGVFRDQASMEGALENLKNVKSRMGGFSIENKGKVFNT
DLMFGLELEFMIDCAEAVVAGALTRKESRGAHFRTDITERDDENWLKHTLMYKDEEAENG
VRVETSDVTITQWEPVKRVY
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaacatgatgtcctgattatcggcggaggactcgccggactcagggctgctgtt
gaggttacgcgcgctggagccgacgtagcggtgatatcgaaggttcacccggttcgcagt
cactcaaacgctgctcagggtggaatcaatgcccctcttaccgaccgtggtgacgattgg
gaaggtcacgcatacgacacgattaagggaagcgactttcttgctgaccaagacgctgtc
gaagtgatgtcgagtgaggccggtgaagccgttctcgaactcgaacgaatgggtgtgatt
ttcagtcgaggtgaagacggcaagctcggaaccagagcatttggtggtcagaaggtcgct
cgaacgttcttcgttggtgcgattactggatcagccatcttgcacgtgctgtttgaacag
tcgctcaagctcggtctcaatgtttatgaagagtggtttgtaaccaagctcatcatcgaa
gacggtgtatgccgaggtgtggtcgcaatcgacctaaagaccggtgaaatgcacacgatc
aaggcaaaagcagtcatcatggctgctggtggagcagggcgagtattcgaaccttccaca
aacgctcttatctgtaccggtgacggtctttcactcgcctatcaggcaggtgtgccgttg
atggacatggagatgatccagtaccacccaacgactcttgctcgtacaggcattctgatg
tcggaagctgcacgtggtgagggtggatacctcctcaacgcagccggcgaacgatttatg
gaaaagaccgctcctgactacatggagcttgcttctcgtgacgttgtttcacgagctgag
cagaccgagatcgatgaaggtagaggaatcgacggtaacgttcttctcgaccttcgacac
ttggggcgcgagtacatcgaagccaagcttggatacctgcaagaagtttctgtggagttc
ctcggtatcgacatggctgaacaacctgttccagttcagcccggaatgcactacatcatg
ggcggtatcaagaccgacgtgaatggcgcaacgaacgttcccgggctatacgctgctggt
gaatgtgctaacgttagtgttcacggtgcaaaccgacttggagccaactcgctgctcgac
acggttgtgtttggtcgacgatcaggcgcacacgctgttgagtacatcaagagtgttggt
gctcactcgaaggctgaagaggatctcgctaacgagaaggctcgaattcaggctttgctt
gatcgacccaagggcgaacgtgtcgcaacgattcgaaacgacatggctcgtggcatgacc
aagggaataggagtgttccgggaccaagcttctatggaaggtgctctcgaaaacctcaag
aacgtcaaatctcgaatgggtggattctcgatcgagaacaagggcaaggttttcaacacc
gatcttatgttcggtctagaactcgaattcatgatcgactgtgctgaagccgttgtagct
ggggcacttactcgtaaagagagccgtggcgctcacttccgaaccgatatcaccgaacga
gacgacgaaaactggctgaagcacacccttatgtacaaggatgaagaagccgagaacggt
gtccgcgttgaaacgtctgacgtgacgataacgcagtgggaaccagtcaagagggtctac
taa
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