Candidatus Lucifugimonas marina: GKN94_05710
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Entry
GKN94_05710 CDS
T10105
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj00020
Citrate cycle (TCA cycle)
lmaj00190
Oxidative phosphorylation
lmaj00650
Butanoate metabolism
lmaj00720
Other carbon fixation pathways
lmaj01100
Metabolic pathways
lmaj01110
Biosynthesis of secondary metabolites
lmaj01120
Microbial metabolism in diverse environments
lmaj01200
Carbon metabolism
Module
lmaj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lmaj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lmaj_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GKN94_05710 (sdhB)
00650 Butanoate metabolism
GKN94_05710 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GKN94_05710 (sdhB)
00720 Other carbon fixation pathways
GKN94_05710 (sdhB)
Enzymes [BR:
lmaj01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GKN94_05710 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_9
Fer4_10
Fer4_18
Fer4_7
Fer4_16
Fer4_3
Fer4
Fer4_6
Fer4_2
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
WFG35208
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All DBs
Position
1267411..1268391
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AA seq
326 aa
AA seq
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MPETTPTTMHVKLKIKRFDPAEAGGKTWWQEYEVDVHPDSTVLDSLIEVREQNDGTLALR
CACRASICGSCGMKVNGSAKLVCKTRVVDVAPNGEQLTIEPMGNQHVVKDLVISLDSFFS
QINRVEPFLQPSFVPEQGEYTASNDSMENLLTSMNCIMCGCCVSDCTVLEVDANFIGPAA
LAKAWRFTEDPRDSKRDERLKNLNDEDGGMWDCTRCMKCVEVCPKGVAPMDRIMELREAA
IEAGNTNTSGYRHTESFYNSVKKNGRLDETRLAIDSAGWTNIPRLLDLAPIGIAAMRKGK
LPPLMPHKSEDHKKVKDLYKSVEDEA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgccagagacgacaccaacaacgatgcacgtaaagctaaagatcaagcgatttgatcct
gctgaagccggtggcaagacctggtggcaggagtacgaagttgatgttcatcccgactca
acagttctcgactcactgatcgaagtacgtgaacagaatgacggtacgctcgccttgcga
tgtgcttgccgggcgtcgatttgtggctcatgtggaatgaaggtcaacggcagcgccaag
ctcgtgtgcaagacccgtgtggtcgatgttgcgcctaacggtgagcagttgactatcgaa
ccgatgggcaaccagcacgttgtaaaagaccttgttatttcgctcgactcgttcttctcg
caaatcaaccgagttgagccgttcttgcagcctagtttcgttccggagcagggtgagtac
actgcttcgaacgattcgatggagaatctgcttacttcgatgaactgcatcatgtgcggt
tgctgtgtttctgattgcacagttctcgaagtcgacgctaacttcatcggaccagctgcg
ctggcaaaagcatggcgcttcactgaagaccctcgtgattcgaagcgtgacgagcgtttg
aagaacttgaacgatgaagatggtggaatgtgggactgcacacgctgtatgaagtgtgtg
gaagtctgtcctaagggcgttgctccaatggaccgaatcatggagcttcgtgaggctgct
atcgaggcaggcaacacgaatacctcaggctatcgtcacaccgaatcgttctataactct
gtaaaaaagaatggtcgcttagacgaaacacgtttggctatcgattcggcaggttggacc
aacatcccacgattgctcgatctcgcacctatcgggatcgccgcaatgcggaagggcaaa
ctgccgccattgatgccgcacaaatctgaagaccacaaaaaagtgaaagacctctacaag
agcgtggaggatgaagcctaa
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