Candidatus Lucifugimonas marina: GKN94_08750
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Entry
GKN94_08750 CDS
T10105
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKN94_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmaj03400
]
GKN94_08750
Enzymes [BR:
lmaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GKN94_08750
DNA repair and recombination proteins [BR:
lmaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GKN94_08750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WFG35778
LinkDB
All DBs
Position
complement(1922830..1923684)
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AA seq
284 aa
AA seq
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MLIGAHVSAAGGSNKAIARAKEIGAECFQIFASSPRMWSAKPIADAVAEKYQAEMKRSGM
GPTVLHGKYLVALGSSDPELLAKSEVALQADIAAANKLGALGVIFHPASHRGQGFDAIID
QFAGSVRKILDNEPGDSLLMLETSAGAGDHIGSSFAELGTLIRAIGNDRVAVCLDTQHVW
AAGYNIAAADTLNAAMDEFDKEIGIDLLRSVHANDSMRELGSSVDRHENIGDGLIGTAGF
QTLMAHEAFKRVPFYLEVPGTGKSGPDKPNIDRLKAIRTQVGAG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgctgattggtgcgcacgtatccgccgctggtggatcgaataaagcgattgcacgagct
aaagagattggagccgagtgcttccagattttcgcttcgtcaccccgaatgtggtcggca
aagccaattgccgatgctgttgccgaaaagtaccaggctgaaatgaaacgttctggcatg
ggaccaaccgtattgcacggtaagtaccttgttgcactcggcagctctgatcccgaacta
ctcgcgaagtcagaagttgctttgcaggccgatatcgccgctgccaataaactaggtgcg
cttggtgtgatttttcacccggcgagtcatcggggtcaaggtttcgacgccatcatcgat
cagttcgctggctcagttcgaaagattctagacaacgagcctggtgattccttgctgatg
ctcgaaaccagtgctggcgcaggagaccacatcggctcttcgtttgctgaactcggtact
ttaatcagggccattggaaacgaccgtgttgccgtatgtctcgacactcagcacgtctgg
gctgccggatataacatcgcagctgccgacacactcaacgctgctatggacgagttcgac
aaagagatcggtatcgacctgcttcgctccgtccacgcaaacgactccatgcgagaactt
ggctcatcggtagaccgtcatgagaacatcggagacggactgatcggaaccgctggtttc
cagactctaatggcacacgaagcattcaagcgagttccgttctatctcgaagttcccggt
accggcaaaagtggacccgacaagccgaacatcgaccggctcaaagctatacgcacacag
gttggcgccgggtag
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