Candidatus Lucifugimonas marina: GKN94_09270
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Entry
GKN94_09270 CDS
T10105
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lmaj Candidatus Lucifugimonas marina
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GKN94_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmaj03021
]
GKN94_09270
Transcription machinery [BR:
lmaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GKN94_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
DUF7194
Motif
Other DBs
NCBI-ProteinID:
WFG35876
LinkDB
All DBs
Position
complement(2030601..2032118)
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AA seq
505 aa
AA seq
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MAQKRQVTKPNDVSAALGDESYTHVLRRIEGAEDEANVETAVSTTVVTRSEMDMWEAGRT
SESTINLNNLAVREVQETEFTEDSVRTYLREIGRVPLLTAADEVVLARAVELAKRLEVIE
KEIQGSSGIDDLNPVTFATGIITKLAGIAETATAVAKYLALPTPITLDDVLTNPDLHAVI
DSKREEELINYLSDALGVEPDEAHKMVVELSVLSRLLPLDIVDALGINPRLDDLDIDCAT
PAFSTALGPLVAVINAHASRVHEEGDKARIHLGEANLRLVVSIAKKHLNRGLPMLDLVQE
GNIGLMRAIEKFDFRKGFKFSTYATWWIRQGLTRALADQSRTIRVPVHVVETLNKIMRMR
RQLGQELNREPSVEEIAAKVELPVDRIAEILNVSLTPISLSSPIGDDGVSEFGDLIEDTS
TTFNSDIVTRDSMRENVDKALGKLKSRERRIIELRFGLFDGRTRTLEEIGSSMNLTRERI
RQIERKALTKLRSDAFTAGLHEFLI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaaaaacggcaagttaccaaaccgaatgatgtttcggctgcgctcggagacgaa
tcctatacccacgtgctaagacgcatagaaggagctgaggatgaagctaacgtagaaaca
gcagttagtaccacggttgtcacacgctccgaaatggatatgtgggaggctggcaggact
tcagaatctaccatcaatctcaataatttggctgtccgggaagttcaggaaactgaattc
acggaagactctgttcggacgtatcttcgtgaaataggccgagtgccacttctgaccgct
gctgacgaggtagtcctcgcacgcgcagttgagcttgccaaacggttagaagttatcgaa
aaggagattcaaggatcgagtggcattgatgacctaaatccagtcacttttgctacgggc
atcattacgaagttggcgggcatcgctgagacggcgactgcggttgctaagtacctcgct
cttccgactcctatcaccctcgacgacgtactcacaaaccccgatttacatgctgttatc
gacagcaagcgtgaagaagaactgatcaattacctctcagatgctctaggtgttgaacca
gacgaagcacacaagatggtcgtggaattatcggtactctcccgtcttctccctttggat
attgtcgatgcactaggaataaacccccgacttgacgatctggacatcgattgcgccacc
ccagcatttagcaccgccctcgggccacttgttgcggtcataaacgcacatgcgtcacga
gtgcatgaagaaggtgacaaagctcggattcaccttggcgaggccaacctcagacttgtg
gtcagcattgccaagaagcaccttaatcgcggtcttccgatgttggacctagtacaggaa
ggcaatatcggactgatgcgtgccattgaaaagtttgactttcgtaaaggattcaagttc
agcacttatgcaacctggtggattcgtcagggactcacgagggcgctagcagatcagtct
aggacgattcgggttcctgttcatgtggtggagacactgaacaaaatcatgcgtatgcgt
cgccagcttggtcaggaactgaaccgggagccaagtgttgaagaaatagctgccaaagtc
gaactgccggttgatcggatcgcagaaatcctcaatgtctcattgactccaatttctcta
tcgtcgccgattggcgacgatggagtgagcgaattcggagacctgatagaagacacgtct
actacgttcaacagcgacatagtgacacgggactcaatgcgtgaaaatgttgataaagct
ctcggaaaacttaaatctcgcgagcgcagaattattgaacttagatttggactcttcgac
ggacggacacgaacgcttgaagagattggcagctcaatgaacctcactcgagaacgaatt
cgtcaaatcgaacgaaaagcattaacaaagttaaggagcgacgcttttacagctggactc
catgaattcctgatttaa
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