Candidatus Lucifugimonas marina: GKN94_11735
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Entry
GKN94_11735 CDS
T10105
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lmaj Candidatus Lucifugimonas marina
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmaj03016
]
GKN94_11735 (truA)
Enzymes [BR:
lmaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GKN94_11735 (truA)
Transfer RNA biogenesis [BR:
lmaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GKN94_11735 (truA)
Prokaryotic type
GKN94_11735 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DNTTIP1_dimer
Motif
Other DBs
NCBI-ProteinID:
WFG36326
LinkDB
All DBs
Position
complement(2564323..2565132)
Genome browser
AA seq
269 aa
AA seq
DB search
MRIALVVEYDGTEFHGSQLQINARTVQGEIEDALRNIFNKNIRMYFASRTDSGVHARGQV
GRFDEETDMSPDQIRKALNHYMTKDVRIRCAQLVQDGPEGFDPRSDATSRTYVYKFNDAR
SAPALDRHFVTHVRKTIDAEVMNVASQSLVGSHDFAAFAGPSTPPDAPTVRNVESASITR
NGDNIEFKITANAYLHQQIRRIAGVLYDVGRGNASTDIVDQLLASANRGEAAHVMPAEGL
CLEAISYDGSGECGLPVLNSADPVDLSVN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattgctctggtagttgagtacgacggaaccgagttccacggctcgcagctacaa
atcaatgcgagaacggtgcagggcgaaatagaagatgccctgcgcaacatcttcaataaa
aacatacgaatgtacttcgctagtcggactgactcgggagtacatgccagggggcaggtt
ggtcgcttcgatgaagaaaccgacatgtcgcctgatcagatcaggaaagcattgaatcac
tacatgacaaaagacgtgcgcattcgctgtgcacagcttgtccaggatggacccgaaggg
ttcgatcctcgtagtgacgcgacttcacgcacttacgtatataagttcaatgacgcccga
tctgcacctgcacttgatcgtcactttgtgacccacgtgcgaaaaacaatcgatgcagaa
gtaatgaacgttgcaagccagtcactcgttggttcgcacgacttcgcagccttcgcaggt
ccaagcactccgcccgacgcacccacagtgcgaaacgtggaatcggcttcgattactcgc
aacggcgacaacatcgaattcaaaatcacagcaaatgcctatctgcaccagcagattcgt
aggattgcaggagtgctctacgacgtaggacgaggtaatgcctcgaccgatatcgtcgat
cagttactcgcctcggccaaccgaggggaagcagcccacgtaatgccagcagaaggactt
tgcctcgaagcgatttcatacgacggttcaggagaatgcggattgcccgtattaaactct
gctgatccggttgatctcagcgtaaactag
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