KEGG   Candidatus Lucifugimonas marina: GKN94_11745
Entry
GKN94_11745       CDS       T10105                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lmaj  Candidatus Lucifugimonas marina
Pathway
lmaj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lmaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GKN94_11745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmaj03021]
    GKN94_11745
   03400 DNA repair and recombination proteins [BR:lmaj03400]
    GKN94_11745
Enzymes [BR:lmaj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GKN94_11745
Transcription machinery [BR:lmaj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GKN94_11745
DNA repair and recombination proteins [BR:lmaj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GKN94_11745
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Sharpin_PH
Other DBs
NCBI-ProteinID: WFG36871
LinkDB
Position
complement(2565492..2566577)
AA seq 361 aa
MYGITPQEELLPAAPEIPDLSITIQENEEAYGRFVAEPLERGWGVTLGNPLRRALLNSLP
GTAVTWVKIDGALHEYSTVPHMREEVVEFLLNVKGIRLRSLADRPGRLRLEVDGEGEVRA
GDIMATADFEIVNPEHHLATLDSPDARLSVEFNVEQGIGYAPASQDEGLPIGVLPVDAIY
TPVRKANFSVESTRVGQRSDLEKLIVEVWTDRTVMPLEAMQSAGNKLMESFFLFTRLDKE
PEEEASPAAGLGISPDVYNTLVETLALSARTLNCLKRAGINRVGEVLSMPKGELLKIRNF
GQKSLDELYDKLAERNLLPEESDDTSGEGEGEDGAEGEEPKAEVEAGAEATENAGADSSE
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtacggcataactcctcaggaggaactgctgcctgccgccccagagatccccgatctc
tctataacaattcaggaaaacgaagaggcttacggtcgcttcgttgcagagccgcttgaa
cgcggctggggtgtcacactcggcaacccactgcgacgagcactgcttaactctttgcca
ggaacagctgtaacgtgggtaaagatcgatggagctctacacgagtactccaccgttcct
cacatgcgtgaagaggttgtggaattcctgcttaacgtaaaaggcatccgcctacgttca
ttggccgaccgcccaggtcgacttcgtttagaagttgatggtgagggtgaagttcgcgcc
ggtgacattatggctaccgccgatttcgaaatcgtaaacccggaacaccacctcgctact
ttggacagcccagatgctcgactttcagttgagttcaatgttgaacagggtatcggctac
gctcctgcaagccaggacgaaggccttccaatcggtgtgcttccagtcgacgcaatctac
actccagttcgcaaggccaacttctcggtcgagtcaactcgagtcggtcagcgatccgat
ctggaaaaactgatcgttgaagtgtggaccgaccggaccgtaatgccgcttgaagctatg
cagtcagctggtaacaagctgatggaaagtttcttcctcttcacacgactcgataaagag
cctgaagaagaagcaagcccagctgctggtcttggcatttctcccgatgtttacaacacc
cttgttgaaactctcgcactttcagcacgaacacttaactgtctcaagcgggcaggcatc
aaccgagttggtgaagtgctttcgatgcctaagggcgaactactgaaaattcgaaacttc
ggtcagaagtcactcgatgagctttacgacaagcttgccgagcgaaacttgctgcctgaa
gaaagtgatgacacctctggcgagggtgaaggcgaagacggagctgagggcgaagagcct
aaggcagaagttgaagccggcgccgaagctactgagaacgcaggagcagactccagtgag
gcataa

DBGET integrated database retrieval system