Candidatus Lucifugimonas marina: GKN94_12370
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Entry
GKN94_12370 CDS
T10105
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lmaj Candidatus Lucifugimonas marina
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmaj03400
]
GKN94_12370
Enzymes [BR:
lmaj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GKN94_12370
DNA repair and recombination proteins [BR:
lmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GKN94_12370
Prokaryotic type
GKN94_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HTH_Tnp_2
Motif
Other DBs
NCBI-ProteinID:
WFG36442
LinkDB
All DBs
Position
2690299..2691678
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AA seq
459 aa
AA seq
DB search
MSRYPISIWWVRSDLRLEDNPALSEATIESEVVIPVFVFDLKSEMPKSKLRSNFLNGALN
DLDSRLREIGSRLLIKQGDTAQELAKIIDGESTIPVFANAGYSRHSKFVESQVARHTQLR
LFSGQVTIDPSGVSKENGEPFKVYSAFRRKWEQVYQKKIFRTDYQSLGIKPEIMSSCDLH
SGKNSLARSSTRANAVRTLRKFTGLKGGINRYSELSDRVDQNTTSGMSEFISLGLIGPNE
LFEVADYLRYSSDDNRYLGSVNSWRNQLIWREFFKHSLDHFPDSENQSLNPNLESIDWIN
QKVDIDAWNDGETGYPIVDAAMRQLSEDGWIHNRLRMIVASFLVKDLLVDWRIGANWFHD
KLVDYDSALNSGNWQWVAGTGFDASPFFRVFNPVLQGRKFDPKGNYVRRWIPEIKKLPST
VIHSPWELPRPPKNYPSPIIDHSWARKRVLSVYADAKSS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagccgatacccaatatcaatctggtgggttagatccgatttaagattggaagataat
ccagctctctcggaagcgacaattgagtctgaggtggtgattccggtatttgtcttcgat
ttgaaatcagagatgccgaaatcaaaattaagatccaacttcctcaacggcgcacttaat
gacttggattcacggttgagagaaataggatccagattgttaataaaacagggggataca
gcacaagaattagcaaagattatcgacggggaaagcacgatacctgtgttcgcaaatgcg
ggttactcgaggcacagcaaattcgttgaatcacaggtcgccagacacacacagttaaga
cttttcagtggtcaggtaactatagacccgtccggagtctcaaaagaaaatggtgagcca
ttcaaggtctactcggctttcaggcgcaaatgggaacaggtctaccagaaaaagatattt
aggactgactatcagtcgctcggaatcaagcctgaaattatgagctcatgtgatttgcat
tccggtaaaaactctttggcacgaagttccacaagagcaaacgcagttcgtactctcaga
aagttcacaggacttaaaggtggaataaatcgttacagcgaactaagtgatcgagtcgac
cagaacacgacctcagggatgtccgaatttatttcgctcggtcttattggcccaaatgaa
ctgttcgaagttgctgattatctgcgatattcatctgacgataatagatatttgggttct
gttaatagctggcgtaatcaattgatctggagggagttttttaagcattcgctggatcat
tttccagactcagaaaaccagagcctgaatcccaatctcgaatctatcgactggatcaat
caaaaggtagatattgacgcatggaatgatggagagactggataccccatagtagatgcg
gcaatgcgacaactttccgaggatggctggattcacaatcgacttagaatgatcgtagcc
tcattcctagtaaaggatttattggttgactggcgaataggtgcaaactggtttcacgac
aaactagttgattacgattcggcactcaactcaggtaactggcaatgggttgcgggcacc
ggcttcgacgcgtccccgtttttcagggtgttcaatccagttttacagggcaggaaattc
gacccaaaaggcaattatgttcgacggtggattcccgaaataaagaaactaccttcaaca
gtcatccactcaccttgggaacttccccgccctcctaaaaactacccctccccgatcatc
gaccacagctgggcgaggaagcgagtactttccgtctacgcagatgcaaaatcctcttag
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