Candidatus Lucifugimonas marina: GKN94_13805
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Entry
GKN94_13805 CDS
T10105
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKN94_13805 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmaj03019
]
GKN94_13805 (groL)
03110 Chaperones and folding catalysts [BR:
lmaj03110
]
GKN94_13805 (groL)
03029 Mitochondrial biogenesis [BR:
lmaj03029
]
GKN94_13805 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmaj04147
]
GKN94_13805 (groL)
Enzymes [BR:
lmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GKN94_13805 (groL)
Messenger RNA biogenesis [BR:
lmaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GKN94_13805 (groL)
Chaperones and folding catalysts [BR:
lmaj03110
]
Heat shock proteins
HSP60 / Chaperonin
GKN94_13805 (groL)
Mitochondrial biogenesis [BR:
lmaj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GKN94_13805 (groL)
Exosome [BR:
lmaj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GKN94_13805 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GKN94_13805 (groL)
Exosomal proteins of breast cancer cells
GKN94_13805 (groL)
Exosomal proteins of colorectal cancer cells
GKN94_13805 (groL)
Exosomal proteins of bladder cancer cells
GKN94_13805 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CC_CEP250
CbiA
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
WFG36705
LinkDB
All DBs
Position
3005853..3007484
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKDLKFSDDARSRLKEGIDVLADTLKSTLGPRGRNVIVDKKFGPPQVNSDGVTIAKEI
DLEDPFANMGAQLLKEVSKKTNDDAGDGTTTSTVLAQAIIAEGFKNVAAGADPMALKRGM
EIAMASVRESIAGLSTPVDSKEQIESVAILSSHDDEMGSLISDVMDKVGKDGVITVDESK
SLSYETEFVEGMQIDRGFLSPYFVTSSERQESVLNDPYVLITSQKISAISDLLPVLEKVL
QTNKNILVIAEDVEGEALATLVVNKLRGTLNVAAVKAPGFGDRRKAMLEDIAILTGGTVI
SEEIGRSMDSVTLDDLGKCKQVVVSKDETTFVDGDGSLDALAGRKAEIETQIADTSSDYD
REKLQERLAKLSGGVAILKVGAATEIEMKEKKQRMEDALSATRAAVEEGIVPGGGTVLIR
AAAALASVSSDNSDEQTGINVLRTSLVAPIKVIAANSGYSGDVILEKVAENSDKNYGFDA
HIGEYGDMVSMGIVDPAKVTRAAVENAVSVAGMILTTEALISEQDEPMPAMPAGGPPGGD
MGF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacctaaagttcagcgatgacgctcgatcccgtctaaaagagggaatc
gacgttcttgctgacactctgaagtcgacactcggcccacgtggtcgaaacgttatcgtc
gacaagaaattcggccctccgcaggtaaactccgacggtgtaaccatcgccaaggagatc
gacctcgaagatccgtttgcaaacatgggcgcacagcttctgaaggaagtctctaagaag
actaacgacgacgctggtgacggtactaccacttcaacagttctcgcacaggcaatcatt
gctgaaggcttcaagaacgttgcagctggtgccgacccaatggcactcaagcgcggcatg
gaaatcgcaatggcttccgttcgcgaatcgatcgctggcctgtcaacaccagttgactct
aaggaacagatcgaaagcgttgcaatcctttcttcccacgacgacgagatgggttcactc
atttccgacgttatggacaaggttggtaaggacggcgttatcaccgttgacgagtcgaag
tctctttcatacgagactgagttcgttgagggtatgcagatcgaccgaggtttcctctct
ccttacttcgtaactagctcagaacgacaggaatcagttctaaacgatccttacgttctg
atcacttcgcagaagatttctgcaatttccgaccttctccctgttctcgagaaggttctg
cagaccaacaagaacattcttgttatcgcagaagacgttgagggcgaagcactcgctact
ctcgttgtgaacaagcttcgtggcacattgaacgtcgctgccgtaaaggctcctggcttc
ggtgaccgccgaaaggcaatgctcgaagacatcgctatcctcaccggtggcacggttatc
tcagaagaaatcggtcgcagcatggactcggttactctcgatgacctcggaaagtgcaaa
caggttgtcgtttctaaggacgaaaccacgtttgttgacggtgatggctctctcgacgct
ctcgcaggccgcaaggctgagatcgagactcagattgctgacacttcatctgactacgac
cgtgagaagctccaggagcgacttgctaagttgtctggtggtgttgccatcctcaaagtc
ggtgcagccaccgaaattgagatgaaagagaagaagcagcgaatggaagacgctctgtct
gctactcgagctgctgttgaagagggaatcgttcccggcggtggaactgttctcatccga
gctgctgctgcacttgcttcagtatcttcagacaactctgacgagcagaccggaatcaac
gttcttcgaacgtctctcgttgctccaatcaaggtcatcgctgctaactccggttactca
ggtgatgtgattcttgagaaggttgctgagaactcagacaagaactacggtttcgacgct
cacattggcgagtacggcgacatggtttccatgggaatcgttgaccctgccaaggtaact
cgtgcagcagttgaaaacgcagtttccgtagctggaatgatcctcacaactgaggctctg
atcagcgagcaggacgaaccaatgccagcaatgccggcaggtggacctcctggtggagac
atgggcttctaa
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