Candidatus Lucifugimonas marina: GKN94_14085
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Entry
GKN94_14085 CDS
T10105
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lmaj Candidatus Lucifugimonas marina
Pathway
lmaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GKN94_14085 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmaj03400
]
GKN94_14085 (recO)
DNA repair and recombination proteins [BR:
lmaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GKN94_14085 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GKN94_14085 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WFG36758
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All DBs
Position
3062277..3063098
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AA seq
273 aa
AA seq
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MTSKRRPVTYTTDGVVVRTSNLGEADRIITLITPVHGIVRGVAKAARKPGSKVGGHLDLL
KHVSVSVRETRTLHGLSQASTLNGFRGLRDDLDRFSRASYISEMSERFSVENGANQPLFR
LLLDTLESLEVTTNPEMIIHFFEMRLLQLSGFSPELSRCVETGVDLEPANHLYSADRGGL
VNSDARPVGESALLPASLNTIKLLRFLSRTDIAQAGVMKAGEDENRQLSRILRAQIHHVL
DRGLRSEAFMDEVRTRPSHNDEPKASSGSSSGN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaaacggcggccggttacatatacgactgatggcgtggttgttcgcacgagc
aatttgggcgaggccgaccggattattacgctgataacgccggttcacgggatagttcgc
ggagtagccaaagcagctcgcaagccgggttcgaaggttggcggtcatctcgatttattg
aagcatgtgagcgtttccgttcgagaaaccagaactcttcacgggttaagccaagcttcg
acactaaatggttttcgtggcctgagagacgatctggaccggttttcgcgggcttcgtac
atatctgagatgtcggagcggttttcagttgaaaacggtgcgaaccagccattattcagg
ttgctgctcgacacactggaatcgctcgaagtaaccacaaatcccgagatgattattcat
ttcttcgagatgagacttttgcagctgagtggattttcaccggagctttcgcgctgtgtg
gaaacgggtgtagatctcgaacccgcgaatcacctttactcggctgatcgcggtggtctg
gttaacagcgatgcacgacccgttggcgaaagtgcgctactgccagcaagcttgaacacg
atcaagttactaaggttcctttcgaggactgatattgctcaggctggagtcatgaaggcc
ggagaggacgaaaaccggcagctttcgcgaattcttcgagcgcagattcatcacgttctt
gatcgtgggttgcgttcggaggcgtttatggatgaagtacgaactcgaccttcgcacaac
gacgagcccaaggcatcgagtgggtcgagttcgggcaactaa
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