Liquorilactobacillus mali: LM596_01890
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Entry
LM596_01890 CDS
T06815
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LM596_01890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmal03021
]
LM596_01890
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_01890
Enzymes [BR:
lmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LM596_01890
Transcription machinery [BR:
lmal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LM596_01890
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LM596_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Ig_GpJ_C
Motif
Other DBs
NCBI-ProteinID:
QFQ73961
LinkDB
All DBs
Position
414690..415634
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPKIHKIEENLDYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITDIQIDGVL
HEFSTIKGVLEDVTQIILNLKKVALRIDSEENQTLEINVAGPVEVTAGDIQGSSDVEVLN
SDLYICTVAEGASFHVRMTANTGRGYVSADDNKARADDMPIGVLPIDSIYTPIERVNYQV
EKARVGQKDDFDKLTLDVWTNGAVTPSEAISLSAKILTEHLTLFVDLTDEAKNAEIMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEADMMKVRNLGRKSLEEVK
NKLVDLGLSLRHDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaaaattcataaaatagaagaaaatcttgattatggtaaa
tttgttgttgaaccacttgaacgtggttatggtactactttaggtaattcacttcgtcgt
attttgctttcatcacttcctggtgcagcaattactgatattcaaattgacggtgtattg
catgaattctcgactatcaagggtgttcttgaagatgtgacacaaatcattttgaatctt
aaaaaagttgctttgcgtattgattcggaagaaaaccaaacattggaaatcaatgttgct
ggtccggttgaagtaacagcgggtgatattcagggaagtagtgatgtcgaggttcttaac
tctgacctgtatatttgtacagttgccgaaggcgcatcattccatgttcgaatgactgct
aacactggtcgtggctatgtttctgctgatgataacaaagccagggctgatgatatgcca
attggtgtgttgccgattgactcaatttataccccgattgaacgtgtaaactatcaagta
gagaaagcacgtgttggtcaaaaagatgattttgataagttgacacttgatgtatggact
aatggtgcagttactccaagtgaagcaatcagcttatctgcgaaaattttaacagaacat
ttaactttatttgttgatcttactgatgaggctaagaatgctgaaatcatggtagaaaag
gaagagacacataaagaaaaaatgcttgagatgacgattgaagagcttgatttgtcagtt
cgttcttataattgcttgaagcgtgctggaataaacacagttcaggaattaactaataag
tctgaagctgatatgatgaaggtccgcaatcttggacgtaagtcattagaagaagttaag
aataaacttgttgatttgggtttatcattacgtcatgatgactaa
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