Entry |
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Name |
(GenBank) SMC family ATPase
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
lmal Liquorilactobacillus mali
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Brite |
KEGG Orthology (KO) [BR:lmal00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lmal03400]
LM596_02430
DNA repair and recombination proteins [BR:lmal03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LM596_02430
Archaeal homologous recombinant proteins
LM596_02430
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
531339..534458
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AA seq |
1039 aa
MKPLKIKMTNFGPYAKQEIDFTRFAEQPLFLISGKTGSGKTTIFDAMCFALFGSTSGDDR
EAEAMRSGFAKESEVTEVEFIFEHQDKVYRIKRQPKQVIIKKRGSGTKIQNMTVLLSYQD
DGKEVELNKVGLVNKFIQELIHLTLEQFTQIIMLPQGKFRNFLDSDSNEKEKLLRELFST
SLFKKWADDIQNQAKETHNQIQEKQNEIDALKGQINGIDSKLDVASWLEAAGERNKESKR
VRDAAKLKLTKMEEQVADAQDNLLKNKLLLQDFETLGSIKNSLLEFRNEDWLKEEEKKLN
ELKWLQKNEQLVLRLEEQQSSYDKTKDKIEEVAAQKRTVEEKLRANQEENRNLEAKEDEI
NSLTDDVRRLKDKKVYVEKAAQLDVERITAGNEFKILKNEITKLEKTLALDQKNIEKQQG
IIKLNEGISEKELKLQETGSNLTKADELIEEMEENKSKVGKLKVTLTKLKADLADTKKQM
SIAKEKHEELDAVLAKNQIIMLSKKLKPGEPCPLCGSLEHPQASMIDELLVEVTESDVED
AAKKQQKLMQNSGEIAGKIDTNEERIAELMITSDQDLQKLNDILNIKEVDFAEMQIRVSE
LKKDLNTGIRELKEQKQNIKDASINLEDMLHEKAKFEEKMESLKEQERGFKLDIAKIEAK
LATVHAEIPNGITSLQQMELLIFEKQQVITDFETEKKKVVDQAVKLATSLTMLTERLEGL
KETNGSLEASLRQNRKKLNEIMFKHDKNLTIAKMRSGIDEVKEIAVIESEIRNYQNKIVE
LKTQIADLEMRTDGKDIQNITELDARLVQLKQDKEFAFAEYEKNSQEYSELFKVTQTVKK
RWTEYQTKLKLDAQWNQLLEVIGGKGKVKLGLERYVLRKYMRQVLQVANVKLMNLTNERY
YFELDKSNGTYATDTGLELDIFDADLGKLRSVKTLSGGESFIAALCLALAMAEVVQSING
GTQIDALFIDEGFGALDDDSLQVALEALQTLEGKNRLIGIISHVSALREQLPAQLRIESK
NGRSVAHYIFDFEELPTLR |
NT seq |
3120 nt +upstreamnt +downstreamnt
atgaagccgctgaaaataaagatgactaattttgggccatatgcaaaacaagaaattgat
tttacacgttttgctgaacaaccgctttttctaatcagtggtaaaactggtagtggaaaa
acgacgatttttgacgccatgtgttttgctctttttggaagcacatcaggggatgatcgt
gaggcagaagcaatgcgctcaggttttgccaaagaatctgaggtgacagaagttgaattt
atttttgaacatcaagataaagtttatcgtattaaacgccaacccaaacaagtcattatc
aaaaagagaggttctggaacaaaaattcaaaatatgacagtactgctgagctatcaagat
gatggtaaagaagttgaactaaataaagttgggctagtcaataaatttattcaagaatta
attcatctgacattagaacagtttacacagataattatgttgccgcagggaaaatttcgg
aattttttagattcagatagtaatgaaaaagaaaaactattacgtgagctcttttctacg
agtttgtttaagaaatgggcggatgatattcaaaaccaagcaaaagagacacataatcag
atccaagaaaagcagaatgagattgatgcattaaagggccaaatcaatggaatcgatagc
aaactggatgtggccagttggttagaggctgcaggtgaaagaaataaagagagtaagcga
gttagagatgctgctaagttaaagttaaccaagatggaagaacaggttgcagatgcgcaa
gataatttactgaaaaacaaactattactgcaggactttgaaacattaggatctattaaa
aacagtttacttgaatttagaaatgaagactggcttaaagaagaagagaaaaaattaaat
gagttgaaatggcttcagaaaaatgaacagttagttttaaggcttgaagaacaacaatcg
tcctatgataaaacaaaggacaaaattgaagaggttgctgcacagaaaagaactgtcgaa
gagaaacttagggcaaatcaagaagaaaataggaatttagaagcaaaagaagatgaaatt
aattctttaactgatgatgtaagacgattaaaagataagaaggtttatgttgaaaaagca
gcgcaattagatgttgaacggataactgctggcaatgagttcaagatacttaaaaatgag
ataaccaaactagagaaaacattagctctagaccagaaaaatattgaaaagcagcaggga
attattaagctgaacgaaggtatatcagaaaaagaattgaaattgcaagaaacagggagc
aatctcaccaaagcagatgaattgatagaagaaatggaggaaaacaagtccaaggttggt
aaattaaaggtaactttaacaaaactgaaagctgatttagcagatacaaaaaagcagatg
agcattgcaaaagaaaagcacgaagaattagatgctgtactagcaaaaaatcagataatt
atgttaagtaagaagttaaaaccaggtgaaccttgtccgctatgcggttcattagaacat
ccacaagcatcgatgatagatgaattgctagttgaggtgacagaaagcgatgttgaagat
gcagcaaaaaagcaacagaaattaatgcaaaatagtggtgaaatagcgggcaagattgat
accaatgaggaaagaattgcagaactaatgatcacttccgaccaagacttgcaaaaattg
aatgatattctgaatataaaagaagttgattttgcggagatgcagatacgggtctctgaa
ttaaaaaaagatttaaatactgggattcgggagctaaaggagcaaaaacagaatattaaa
gatgcctcaataaatcttgaagatatgctgcatgaaaaagcaaagtttgaagagaaaatg
gaatcgttaaaagaacaagaacgtggttttaaactcgacattgctaaaatagaggcaaaa
ttagcaacggttcacgcagaaataccaaatggcattacttcattacaacaaatggaacta
cttatattcgaaaaacaacaagtaattacagattttgagacagaaaagaaaaaagttgtc
gatcaggcggtcaagcttgctaccagcttaacgatgcttactgagagacttgaaggtctt
aaagaaacaaatggttctttagaagcgagtttgcgacaaaatagaaaaaaactcaatgaa
attatgttcaagcatgacaagaatttaaccattgctaagatgaggtcagggattgatgag
gtaaaagagattgctgtgattgaatcagaaattcggaattatcagaataaaattgttgaa
ttaaagacacaaattgctgatcttgaaatgagaacggatggtaaagatattcaaaatatt
acagaattagatgcaagactggtgcaattaaaacaggacaaagaatttgcttttgcggaa
tatgaaaagaattcacaggaatactctgaactattcaaagttactcagactgttaaaaaa
agatggaccgaatatcagacaaaactcaaacttgatgctcaatggaaccaattattggaa
gtgataggtgggaaagggaaagttaaattaggcctagagcgatatgtcttgcgcaaatat
atgagacaggtgctgcaagtagccaatgttaaattaatgaatctaacgaatgagcgatat
tattttgaacttgacaagagtaacggaacttatgctacagatacgggactcgagttggat
atttttgatgctgatttgggtaaacttagaagtgtcaagactctttctggtggtgagagt
tttattgcggcattgtgtctagcgcttgccatggcagaagttgttcagagtataaatgga
ggaactcaaattgatgctttgtttattgatgaaggttttggtgcactggatgacgattca
ttgcaagttgcattagaagcactccagactttagaaggaaagaatcgtttaattggaata
attagtcatgtaagtgcattacgtgaacaattgccggcacagttaagaatagaatctaaa
aatggacgcagtgtggcgcattatatttttgattttgaagagttgccaactcttagatag |