Liquorilactobacillus mali: LM596_02690
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Entry
LM596_02690 CDS
T06815
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LM596_02690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmal03019
]
LM596_02690
03009 Ribosome biogenesis [BR:
lmal03009
]
LM596_02690
Enzymes [BR:
lmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LM596_02690
Messenger RNA biogenesis [BR:
lmal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LM596_02690
Ribosome biogenesis [BR:
lmal03009
]
Prokaryotic type
rRNA helicases
LM596_02690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
TENA_THI-4
Motif
Other DBs
NCBI-ProteinID:
QFQ74108
LinkDB
All DBs
Position
591858..593369
Genome browser
AA seq
503 aa
AA seq
DB search
MKFTELGLSENILKAINRSGFEEATPIQAETIPLVLKGEDVIGQAQTGTGKTAAFGLPIL
NKIDTKKNEIQAVIVSPTRELAIQTQEELYRLGRDEHAKVQVVYGGADIRRQINSLKKAP
QILVGTPGRLLDHIRRRTVKLDSVNVMVLDEADEMLDMGFVEDIESIIKAVPEKRQTLLF
SATMPPAILKIGEKFMHKPSVVKIKAKELTTDLVDQYYVRARDFEKFDVMTRIFDVQAPE
LTIVFGRTKRRVDELSKGLEARGYNAKGIHGDLSQQRRMSILKQFKAGKLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGHHGVSVTFVTPNEMDYLRVIEKLTKK
RMSNLKPPTEQEAFNGQITSAIDDIDDLVKKTDNKKFEKQTSELLAKYDVQDLVAALLNE
MTTANEVPVKITPERPLPRHNKKGSSKHYDRNRRNKGGYQRRDNKSGNYKNSNGRKPKKD
QNRDKFNRDNKKKRKFTIRTKEG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaacttggtctttcagaaaacatcttaaaggcaataaaccgtagtggg
tttgaggaagcaacacctattcaggcagaaacaattccattggttttgaagggtgaggat
gttattggacaagctcaaacaggtacggggaagactgctgcttttggactaccaatttta
aataagattgatacgaagaagaatgaaatacaagcagtaattgtttcacctactcgtgag
ttggcaatacaaacacaagaggagttatatcgcttagggcgcgatgagcatgcaaaggta
caagtagtgtatggtggtgcggatattcgtcgtcaaatcaactcattaaagaaagctcca
cagattttggttggtacaccaggtcgccttttggatcatatcaggagaagaactgtcaag
cttgactctgtcaatgtgatggtacttgatgaagctgatgaaatgcttgatatgggattt
gttgaagatattgagagcattattaaagctgttccagagaaacgacagacattgttattc
tctgcaactatgccaccagcaattctaaaaattggtgagaagtttatgcataagccaagt
gttgttaagattaaggcaaaggaactaacaacagatttggtagaccaatattacgttcgt
gcgcgtgactttgagaaatttgatgtaatgacaaggattttcgatgttcaagcacctgag
cttacaattgtctttggtagaactaagagacgagtagatgaactttcaaaggggttagaa
gctcgagggtataatgctaagggaattcacggagacttgtcacagcaacgtcgtatgagc
attcttaagcaatttaaggcgggtaaactggatatcttagttgctactgatgttgcagca
cgtgggcttgatatttcaggtgttactcatgtctataattatgatattccacaggatcct
gaaagttatgttcatcgtattggtcgtactggtcgtgcaggacatcatggtgtttcagtt
acttttgtaacaccaaatgaaatggattatttacgtgttattgagaaattgacaaagaaa
cgcatgagcaatctgaagccacctacggaacaagaagcattcaatggacaaattacttca
gcaattgatgatattgatgatcttgttaagaagactgataataagaaatttgaaaagcaa
acttctgaattgttggcaaaatatgatgtccaggatttagttgcagcattgttgaatgaa
atgacgactgcaaatgaggttccagttaaaattacacctgagagaccattaccaaggcat
aacaagaagggatcttctaagcactacgatcgtaaccgcagaaataagggcggttatcaa
agaagagacaataaatcaggtaattataagaatagtaatggtcgtaaaccgaaaaaggat
caaaatcgtgacaaattcaaccgtgacaataagaagaaaagaaagtttactattagaacc
aaagaaggctaa
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