Liquorilactobacillus mali: LM596_03065
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Entry
LM596_03065 CDS
T06815
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03030
DNA replication
lmal03430
Mismatch repair
lmal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM596_03065 (holB)
03430 Mismatch repair
LM596_03065 (holB)
03440 Homologous recombination
LM596_03065 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmal03032
]
LM596_03065 (holB)
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_03065 (holB)
Enzymes [BR:
lmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM596_03065 (holB)
DNA replication proteins [BR:
lmal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LM596_03065 (holB)
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LM596_03065 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
TIP49
Motif
Other DBs
NCBI-ProteinID:
QFQ74167
LinkDB
All DBs
Position
665905..666900
Genome browser
AA seq
331 aa
AA seq
DB search
MSDNNEIRKQQTVLTDYFANMIDQGHLAHAYLLTGPKGIGKRALALWITQGIFCKNKIAG
NPCLDCEECRRIESGNHPDVVHVVPDGLSIKVDQIRFLKSEFSKSGVEGNRKAFIIEDAD
KMTISAANSLLKFLEEPSGDVVAFLLTETVNRILPTIVSRCQLFELAKPSSAQLIAMLKK
KGITTDKAVILGNLTDSLAESEKIAANENFDKLVRNICVWYLHILQEDARCFVEVQMSLL
PLINNKDDEVILLNLIILLVKNSISVYYGKKDNIFVKFQAEFTGLIERLTADKITQAVEL
VLETRKKLAVNVSFQNVIEALTIDLSQCYHV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataataatgaaatacggaagcagcaaacagttttaactgattattttgctaat
atgatagaccagggtcatctagcgcatgcatatttactaactggtccaaaaggaataggt
aagcgcgcacttgcattatggattactcagggaattttctgcaaaaataagattgcgggt
aacccatgtttggattgtgaagaatgcaggagaattgagagtggcaatcatcctgatgta
gttcatgttgtacctgatggtttgtcgataaaagtcgatcaaattcgttttttgaagtca
gagtttagtaaaagcggggttgaaggcaatcggaaggcctttattattgaagatgctgat
aagatgacgataagtgctgctaacagtctgttgaagtttctcgaggagcccagtggtgat
gttgttgcttttttactgacagaaacagtcaatcgaattttaccaacaatagtttcacgc
tgccaactgttcgaacttgcgaaaccttctagtgcccagttgattgcaatgttaaagaaa
aaaggaattacgacggataaggcagttattttaggtaatttgacagatagtttggctgaa
tctgaaaaaatagcagcaaatgaaaattttgataaacttgtccggaatatatgtgtgtgg
tatttacatattttacaagaggacgcaaggtgttttgtggaagttcaaatgagcttattg
cccctaataaataacaaagatgatgaagttatcttgttgaatttaataatcttacttgtt
aaaaattcaatatctgtatattatggtaagaaggataatatttttgtgaaatttcaagca
gagttcacaggattaatagaaagattgaccgccgacaaaattacgcaagctgttgaacta
gttctagagacaagaaaaaagttggcagtaaatgtctcgttccagaatgttattgaagca
ttgacgattgatttgagtcagtgttaccacgtatag
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