Liquorilactobacillus mali: LM596_06220
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Entry
LM596_06220 CDS
T06815
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmal
Liquorilactobacillus mali
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmal03032
]
LM596_06220 (topA)
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_06220 (topA)
Enzymes [BR:
lmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LM596_06220 (topA)
DNA replication proteins [BR:
lmal03032
]
Prokaryotic type
DNA Topoisomerases
LM596_06220 (topA)
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LM596_06220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
IBR_1
Motif
Other DBs
NCBI-ProteinID:
QFQ74730
LinkDB
All DBs
Position
complement(1305996..1308098)
Genome browser
AA seq
700 aa
AA seq
DB search
MPKTQKKTTTKRKVKKNLVIVESPSKAKTIEKYLGSRYKVMASLGHIRDLPRSTMGVDVE
HDYEPHYISIRGKGDVIKELRKEAKKAAHVYLAADPDREGEAIAWHLSYLLGLNPEDKNR
VVFNEITKDAVKNSFKNPRAIDMNLVDAQQARRVLDRLVGYSISPILWAKIKKGLSAGRV
QSIALNLIIKREQEIREFIPEEYWSIDAQFQASRTKFNADYYGVNGKKKELHNNDEVQEI
MQKIDKNNPFNVTRVVPKERKRFPALPFTTSTMQQTANNTLNFRTQKTMMVAQQLYEGIN
IGKGGAVGLITYMRTDSTRISDIAKHEASAFIHETYGAEYAAVKPRKGKLAEGAQDAHEA
IRPSSVLRTPESLSAYLNKDQMKLYSLVWSRFVASQMTPAIVDTMSVDIEQNSVMYRAKG
SKMKFLGFTKVYSESKRKDNILPDLEVGQEVKLVTNQPNQHFTLPPARYTEATLIKTLEE
NGVGRPSTYAPTLNTIQKRYYVKLVARKFESTELGEIVNNMIVKCFPDILNVDFTAQLEG
QLDEIEEGKQEWVKVIDSFYHPFAKEVDAAEEKMAKVKIKDEPAGINCDVCGAPLVIKLG
RYGKFYACSRFPDCRNTKPITKEIGVVCPECHKGQIIERKSKKNRIFYGCDRYPDCEFVS
WDKPVGRDCPKCQHYLVEKKTKKGMQVKCSNCDYQEEIQK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagacccagaagaaaacaacaacaaaaagaaaagtaaagaaaaaccttgtaatt
gttgagtctccatcaaaagctaaaacgattgaaaagtatttaggatctcgatacaaggtt
atggccagtttaggccacatcagagacttaccgagaagtacgatgggggtcgatgttgaa
cacgattatgaaccccattatatttcgatacgtggtaaaggcgatgttatcaaagaattg
cgcaaagaggctaagaaagctgcacatgtttatcttgcagccgatcctgatcgagaggga
gaagcaattgcgtggcatctttcttatctattagggctaaatcctgaagataagaatcga
gttgtttttaatgaaatcactaaagatgcagtaaagaattcattcaaaaatccacgtgca
attgatatgaatcttgtggatgcgcagcaagcaagacgtgttcttgaccgcctagtaggt
tattctatcagcccaatactttgggcaaaaataaaaaaaggattgagtgcaggtcgtgtg
cagtcaattgctttgaacctgattattaaaagagagcaagaaatccgtgagtttatacct
gaagagtactggtcgattgatgctcaatttcaagctagcaggactaagttcaatgctgat
tattacggagtaaacggtaagaaaaaggaattgcataacaacgatgaagttcaagaaatt
atgcaaaagattgataagaacaacccgtttaatgtgacacgggttgtccctaaagagcgc
aagcgattcccagcacttccttttacaacaagtacaatgcagcagacagccaataatacg
cttaactttagaactcaaaaaacgatgatggttgcgcaacagctttatgaaggaattaat
attggaaaaggcggcgcagtgggactaattacctatatgcgtacggattcaaccagaatt
tctgatattgccaagcacgaagcttctgcttttatccatgaaacttatggtgcagaatat
gctgcagttaaaccacgcaaaggcaaactcgctgaaggtgcacaggacgctcatgaggct
atccgtccttcatcagttttacggacaccggagtcactttcagcatatttgaacaaggat
caaatgaagctgtattcattggtttggtcgcgctttgtagcaagccagatgactccggca
attgttgatacaatgagtgttgatattgagcagaattctgtgatgtatcgggcaaaagga
tcaaagatgaagttccttggttttacgaaggtttatagtgagagcaagcgtaaagacaac
attttgccagatctagaagttggtcaagaagttaaactagtaaccaatcaacctaatcag
cattttactttaccgcctgcaagatatactgaagctacattgattaaaacacttgaagaa
aatggtgttggtcgtccttcaacctatgcacctacgctaaatactattcaaaagcgctat
tatgtaaaactcgttgcacgtaaatttgagtctactgagttgggcgaaatagtaaataat
atgattgttaagtgtttcccggatatcttgaatgttgattttactgcccaattagaaggt
cagttggatgagattgaagaaggaaagcaggaatgggttaaagtcatcgatagtttctat
cacccctttgcaaaagaggttgatgctgctgaagagaaaatggctaaagttaaaattaaa
gatgaacctgcaggtatcaactgtgatgtttgtggtgcgcccttagtaattaaacttggt
cgttatggtaaattttatgcatgcagtcgtttccctgattgtcgtaacacaaaacctatt
acaaaggaaatcggagtagtttgtccagaatgtcataaggggcagattatcgagcgcaaa
tcaaaaaagaatcgtattttctatggatgtgaccgttatcccgattgtgagtttgtttca
tgggataagccagttggtcgtgattgccctaaatgccagcattacttggttgagaaaaag
accaaaaaaggaatgcaggttaaatgtagcaattgcgattatcaagaggaaattcaaaaa
taa
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