Liquorilactobacillus mali: LM596_06325
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Entry
LM596_06325 CDS
T06815
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LM596_06325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmal03019
]
LM596_06325
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_06325
Enzymes [BR:
lmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LM596_06325
Messenger RNA biogenesis [BR:
lmal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LM596_06325
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LM596_06325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
TniB
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QFQ74749
LinkDB
All DBs
Position
complement(1328370..1329803)
Genome browser
AA seq
477 aa
AA seq
DB search
MNNLQLKQLLKQYFGYSEFKKGQIEIIKSLLANNSTLGILPTGTGKSLCYQLTGKIIRKP
VLIISPLLSLMNDQVEQLKYSGEKKVVALTSELSYNEKDFILNNIASYSFIYVSPEMLKN
DKVALQLSKIDIGLLVVDEAHCISQWGPDFRPDYLRIKNFRKLLHCPLTLALTATATSEV
AHDIQVNLFDSSETSHVIRYSVDRPNIFLAVHESPSSTEKNMYLIELISQLNGPGLIYFS
SKKQADRISEMIRIKTNLRAASYHADLSVMNRYTIQHQFMENQLDIVCATSAFGMGINKQ
DVRYVIHYHLPSDLSSYVQEIGRAGRDGKRSIAVLLYSKTDIGLQQQLSIDSLPDDFDID
NFNTASELDDPSSTDRVLQYYFDQNIKTDKIKAIFSKRRKEKLEKLNVLLRYITNDGCRR
KYLLKYFRESVIPEHNEKCCQLRGEELKLNEFKFEKKKYKEDSLVNYKVILESFFKT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgaataatttgcaattaaagcaacttttaaagcaatattttggatattctgagtttaaa
aagggacagattgagatcatcaaaagcctgcttgcaaataattcaacattaggtattcta
ccaacgggaacaggtaaatctttgtgttatcagttaactggcaagattattaggaaacca
gtattgataatatctccacttttgtctttgatgaatgatcaggtagaacaattaaaatat
agcggtgagaaaaaagttgtggcattgacgtctgaattatcatataacgagaaagacttt
attttgaataacatagcatcttattcattcatttatgtatcaccggaaatgttaaaaaat
gataaagttgcacttcaattatcaaaaatagatattggactcctagtcgttgatgaggct
cattgcatttcacaatggggacccgattttagaccagattatttgcgcattaaaaacttc
cgtaaattgttacattgcccgcttacgctggctctgactgcgacagcaacaagtgaagtt
gctcatgatatacaggttaatttatttgatagcagcgagacttcgcatgtaatccggtat
tctgttgatcgtcctaatatttttttggccgtacacgagtcaccatcttctacagaaaaa
aatatgtacttgatagaattaatttctcagcttaatgggccaggtttaatttatttctcg
agtaagaaacaggctgatagaattagtgagatgatcagaataaaaactaatttgcgcgcg
gcgtcatatcacgcagatttaagtgtaatgaatcgatatacgatacagcatcagtttatg
gaaaatcagttagacattgtctgtgctaccagcgcttttggaatggggataaacaagcag
gatgtgcgctacgtcatacattaccatctaccgagtgacttgagtagctatgtgcaagaa
attgggagagcgggtagggatggaaaaagaagtattgcagtcttattgtattcaaaaaca
gatattggattacagcaacagctcagcatagacagtttgcctgatgattttgatattgat
aattttaatactgctagtgaacttgatgatccatccagtacggatagagtcttgcagtat
tattttgaccaaaatataaagactgacaaaattaaagcaattttctctaagagacgtaag
gaaaaattagagaaattaaatgtactgttgcgatatattacaaatgatggatgcagaaga
aaatatttactaaaatattttagggaaagtgtgatacctgagcataacgaaaaatgttgt
caattaaggggagaagaattgaagttaaatgagtttaagtttgaaaaaaagaaatataaa
gaggattcacttgtgaactacaaggtaattcttgaatctttttttaagacttag
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