Liquorilactobacillus mali: LM596_06390
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Entry
LM596_06390 CDS
T06815
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03030
DNA replication
lmal03430
Mismatch repair
lmal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM596_06390 (dnaE)
03430 Mismatch repair
LM596_06390 (dnaE)
03440 Homologous recombination
LM596_06390 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmal03032
]
LM596_06390 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_06390 (dnaE)
Enzymes [BR:
lmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM596_06390 (dnaE)
DNA replication proteins [BR:
lmal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LM596_06390 (dnaE)
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LM596_06390 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QFQ75840
LinkDB
All DBs
Position
complement(1340385..1343732)
Genome browser
AA seq
1115 aa
AA seq
DB search
MGGAALQVISSYSLLQSSIRLKDVIKSAKAKGYTALALTDINVMYGVLSFYDACRVEGIK
PLIGMTLETSTDKKETLILIAKNENGYHNLIQISTQKQLLLAKNDAEFIIRENAALFEDI
ITIIPPEDSFFVNKLLNGESELASKYLKQSRNLLQENLYIGISTATSEALYDKVLQYANK
MNIKTVAVESIKYLEKNDLFVCKVMNAIKQNKQLDSKDLQYANNLNGSAWLKPLNDIKQN
YLEKNRFEAFENMISLTKRVDFAFSPKRVILPKFQTPQGINANIYLKQLCSRGMQARMRD
QPQSIIEKYLQRMDKELNIIKKMGFADYFLIVWDVTNYAHEHGILVGPGRGSAAGSLVSY
LLGITDVDPIKYNLLFERFLNEERAQMPDIDLDIPDNRRQEIIEYVNRKYGENHVAQIIT
FGTFGAKQALRDVARVMGFSQVESNNWSRVIPSQLGITLADAEKKSIQLRNLINENERNQ
LLFKTALLLEGLPRHYSVHAAGVILSDADLRKVVPLQMGNDDVLLTQYTKDDVERVGLLK
IDFLGLRNLTILNSTLSGIKKNFGQTVDINKISLNDEETLSLFQRADTSGVFQFESSGIR
NVLRNLYPTSFEDIAAVNALFRPGPMENITHFIARKHGKEKIVYPDNSLIPILKNTYGIL
VYQEQVMQVASIMGGFTLGQADILRRAMSKKKASVIEELKSKFVDGAVKLGYSQKNAERV
YDYIERFANYGFNRSHAIAYSKIAFQLAYLKVHYAAPFFAAILNSVIGDRIKTRDFIVEA
KQHQLQIETPNINRSNYYTFSGKKNLIIGLGNIKTLRRDFIKEIIEERKNTGRYSSFDDF
IRRINHKFLKEEPLKALIYSGTFDSFSENRATLLGNLSKKMSNVELSGESSELLSLLAPK
QEKYTELPLEEILAGEQKYLGIFLSAHPVEQFAEVAQLHNAKMIANVHENEKQQILCLVK
KIKVIRTKTGQQMAFLTVEDQTGEIELTLFPGIFEKVDDDLKTNQVYLVSGKSEKRNQKI
QIIVSTMVSAESLKTEMKGRLFLRLTENDSSSINKQLLKTLQLHAGKVPVVLYEEKKAVK
WVLDEKYWVNRSPELEEQLIKLIGKNNVVFQNENK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgcagcacttcaagtgattagcagttatagtttgctgcaaagttcaattcga
ttaaaagatgtcattaaaagtgctaaagcaaagggatatacagcattagctttaacagat
atcaatgttatgtacggagtcctttcattttatgatgcatgtcgagttgaaggcattaaa
ccacttatagggatgacactagagacatccaccgacaaaaaagaaacactgattttaatt
gctaaaaacgagaacggttatcacaacttgattcagatttcgactcaaaaacaattgtta
cttgcaaagaatgatgcagaattcataatcagggaaaatgccgctctttttgaagatata
attacgataattccacctgaggatagtttttttgtcaacaagctattgaatggagagagt
gaacttgcaagtaaatatctgaaacaaagtagaaatttattgcaagaaaatttgtatatt
gggataagtacagcaacatcagaggcactgtatgataaagtattgcaatatgcaaataaa
atgaatattaagaccgttgctgttgaatctatcaagtatttagaaaagaatgatttgttt
gtttgtaaggtcatgaatgcaattaagcagaataaacagctagacagtaaagatttgcag
tatgcaaataatctgaatggttctgcatggctaaaaccgctaaatgacataaagcaaaac
tatttagaaaaaaatcgttttgaagcatttgaaaatatgatttctttaactaaacgagtt
gatttcgctttttcgccaaaaagagtaatacttccaaaatttcaaacaccgcagggcatt
aatgccaacatttacttgaaacagctttgcagcagaggaatgcaggcaagaatgcgagat
cagccgcagagtataattgaaaaatatctgcaaaggatggacaaggaattaaatatcatt
aagaaaatgggatttgcagactatttcttaattgtttgggatgtcacaaattatgctcat
gaacatggaattttggttggtcctggccgtggctctgcagcgggttcgctggtttcgtat
ctcctaggaattacagatgttgacccaatcaaatacaatttgctttttgaacgttttttg
aatgaagaacgtgcacaaatgcccgatattgacttggatattccagataatcgacgacag
gaaataattgaatacgttaatagaaaatatggtgaaaaccacgtggcacagataatcact
tttgggacatttggtgcaaaacaggctttgcgcgatgttgcaagagtaatgggtttttcg
caagtagaaagtaataattggagtcgtgtaattcccagtcaattgggaattacactggca
gatgctgagaagaaatctattcagttgcggaatttaatcaacgaaaatgagcgcaatcaa
cttttatttaaaactgcgctgctactggaaggcctacctagacattattcagttcatgct
gcaggagtgattctaagtgatgcagatctgagaaaagtagtgccattgcaaatgggtaac
gatgatgttttgctgacgcaatataccaaagatgatgttgaacgtgtaggattgctgaaa
attgattttttaggtttaagaaacctaacgattttaaatagtacattgtctgggataaag
aaaaattttggccaaaccgttgatataaataaaatttcattgaatgatgaagagacgctt
agtctttttcaaagggccgatactagcggtgtatttcagtttgaatcatccggtattcgc
aatgttttgcgtaatctttacccaacttcttttgaggatattgctgctgtaaatgcattg
tttagacctggtcctatggagaatatcacacactttatagctcgtaaacatggtaaggag
aagattgtttatccagataattcgctaattccgatcctgaagaatacgtatgggattttg
gtttatcaggagcaagttatgcaagttgcttctataatgggtggatttactttagggcaa
gccgatatattgcgaagagcaatgagtaaaaagaaggctagtgtaattgaagaattgaag
tccaagtttgtcgatggcgctgtaaagttgggatattctcaaaaaaacgcagaacgagtc
tacgattatattgaacgttttgctaattatggatttaaccgttcgcatgccattgcatat
tctaaaatagcatttcagcttgcctatttaaaagttcactatgctgcgcctttttttgca
gcaattttgaattctgttatcggtgacagaataaagacaagagattttatagttgaagca
aagcagcatcaattgcagattgagactccaaatataaacaggagcaattattatactttc
tctgggaaaaagaacttgattattggtttgggcaatatcaagaccttgcgcagagatttt
atcaaagaaatcattgaagaacgtaagaatacaggtcgttatagttcgtttgatgacttt
ataagaagaattaatcacaagtttttaaaagaggagccacttaaggctttgatatattct
ggcacttttgactcgttttctgaaaatcgtgcaactttattgggcaatcttagtaaaaag
atgagcaatgttgagttgagtggagagagcagtgagttgttatcattactagcacccaag
caggaaaaatatacagaacttcccttggaagagattttagccggagagcagaagtatctt
ggaattttcctttcggctcatccagtagagcagtttgcggaggttgcacagctgcataac
gcaaagatgatagcaaatgttcacgaaaatgagaagcagcaaattttgtgtttggttaag
aagataaaagtaattagaacaaaaactggtcaacaaatggcttttttaacggtagaggat
caaacaggcgaaatcgaattgacgctttttccaggtatttttgaaaaggttgatgatgat
ttgaaaacaaatcaagtttatcttgtttctggaaagagtgaaaaacgcaatcaaaagata
caaattatcgtttcaacgatggtttcagctgaaagtttgaaaacagaaatgaaaggaaga
ttatttttaagactaactgaaaatgattcaagcagtataaacaaacaacttttgaaaaca
ttacagttacatgctggaaaagttccagttgtcttgtatgaggagaaaaaagccgtgaaa
tgggttttagatgaaaagtactgggtaaacaggtcgccagaattagaagaacagttaata
aagttgattggtaaaaacaacgttgtctttcaaaatgaaaacaaatga
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