Liquorilactobacillus mali: LM596_07295
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Entry
LM596_07295 CDS
T06815
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LM596_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmal03400
]
LM596_07295
Enzymes [BR:
lmal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LM596_07295
DNA repair and recombination proteins [BR:
lmal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LM596_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
TsaE
AAA_22
5_3_exonuc
RsgA_GTPase
AAA_29
nSTAND3
UvrD_C
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_28
AAA
AAA_12
Zeta_toxin
RRF_GI
NPHP3_N
AAA_16
HTH_IclR
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
QFQ74935
LinkDB
All DBs
Position
complement(1520556..1522973)
Genome browser
AA seq
805 aa
AA seq
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MSQLDLLDRSDETEKYIIGSVDAIFFESPETFYKVIQVKIAQTNLNWSEKEIVATGSFAD
INEGVEYHFVGKLVTHPRYGQQFQVFNYQNEMPSSKSGLIAYLSSDTFTGIGEKTATKIV
ETLGMDAIAQIIADEKKVKKLGLSKKQQETLIENLRANNGTQQIIVELNGFGFGSQMAAA
IYNRYREKTVEIIHEDPYRLAREIPGIGFKRADQIAEKIGLAADTPQRIKAGLLQGIYDI
CQEKGNTYTNAEQLLNQTMVLLSNSRRVELSPELLADQLLELANDGVVVGEENRIYLRKY
YESEWRIAERIKEIKETKINVGSNFDDDFKHLIAKVEEQLGIKYGVDQIEAIKEALQSKV
YLLTGGPGTGKTTIINGIVAIYAALKDISLDINEYKNEQFPILLAAPTGRASKRMNETTG
LPASTIHRLLGLGSGDEDDSEHNQLEGSLLIVDEMSMVDTGLFDILMDAIPKNMQVILVG
DKDQLPSVGPGQVFADLLASPDLPKIELKAIYRQENESSIITLAHAIKDGTLPADIKEGK
RDRSFIECNSYQIENVVRQVVERAKAKGFKTRDFQVLAPMYRGPAGIDKLNEMLQEILNP
HITGKKQVEFNKQYFRIGDKVLHLVNAPENNIFNGDLGEIVGIVTSKESKDHQESLIIDF
DDNEVEFKRKDWIKIRLAYCISIHKAQGSEFKMVILPMVQQYTRMLNRNLLYTAVTRARD
FLILLGEPSAYISSVNRVAVNRETTLIQRLMAVFNPSPADNVEKADNISEKKGTYESDTI
LTTDLINSGKIDPMIGMGEITPSSF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaattggatttactagataggagtgatgagactgaaaagtatatcattggcagt
gtggatgccattttttttgagagcccagaaactttttacaaagtaatccaagttaagatt
gcgcaaactaatttaaactggagtgaaaaagagattgtcgcaacaggtagttttgccgat
attaatgagggagtcgaatatcattttgtaggtaaattagtaactcatccgcgatatgga
cagcaatttcaagttttcaattatcaaaatgaaatgccttctagcaagtcgggcttaatt
gcatatctgtcgagtgatacttttactggaattggcgaaaaaacagctacgaagattgtt
gagaccttagggatggatgcaattgcacagattattgctgatgaaaaaaaggtaaagaaa
ttgggtctcagcaaaaagcagcaagaaactttaattgagaatttaagagctaataatgga
actcagcaaattattgttgaactcaatggttttggctttggaagtcaaatggcagcggca
atctataaccgatatcgtgaaaaaacagttgaaatcatccatgaggatccatatcgtttg
gcacgagaaattcccggaattgggtttaaacgtgctgatcaaattgcagaaaaaattggc
ttggcagcagatacgccacagagaattaaggcagggcttcttcaaggaatatatgatatt
tgccaagaaaagggtaatacatatacaaacgccgagcagttactcaatcaaacaatggtt
ttattaagcaatagtcgcagagttgaactttccccagaactacttgcagatcagcttttg
gaattggcaaatgatggtgtggtagtgggggaagaaaacagaatttacttaagaaaatac
tatgaatctgaatggagaattgccgagcgaattaaagagattaaggaaacaaaaattaat
gttggcagtaattttgatgatgattttaaacacttaatagcaaaagttgaggaacaactt
ggaataaagtatggagttgatcagattgaagctatcaaagaagcactccaatctaaagtt
tacttgctgactggtggtccaggtactggaaaaacaacaatcatcaacgggatagttgca
atttacgccgcgttaaaggatatttcactagacattaatgaatacaaaaatgagcaattt
ccaattttactggctgcaccaacgggcagggcatctaagagaatgaacgagacaactggt
ctacctgccagtacgattcatcgattgttgggactaggtagtggcgatgaagatgacagt
gaacataatcaattagagggaagtctgttgattgttgatgaaatgtccatggttgatact
ggtttatttgatattttaatggatgctatacccaagaatatgcaggttattcttgtcgga
gataaagatcaactgccatcggttgggcctggtcaagtttttgcagatttgttggcaagt
cctgatttacccaagattgaattgaaggcaatctatcggcaagaaaatgagtcttcaatt
attactttagcgcatgcaattaaggatggaactttacctgccgacataaaggaaggtaaa
agagatcgctcttttattgaatgtaattcttatcagattgaaaatgttgttcggcaagtt
gtcgaaagggctaaggctaaaggctttaaaacacgcgactttcaagtgcttgcgccaatg
tatcgagggcctgctggaattgataaattaaatgaaatgctgcaagaaattttgaatcca
catattacagggaaaaaacaagttgagtttaataaacaatatttcagaattggcgacaag
gttctacatcttgtaaatgcacctgaaaataatatctttaacggcgatcttggtgaaatt
gtaggaattgttactagtaaggaaagcaaggatcatcaagagtccttgataattgatttt
gatgataatgaagttgagtttaagcgcaaagattggataaaaattcggttagcatattgt
atatcaattcataaagcccagggcagtgagtttaaaatggttattctaccaatggttcag
cagtatactagaatgcttaatcgtaatcttttgtatacggcagttacacgggcaagagac
tttttaatcttattaggcgaaccttctgcttatataagcagcgttaatcgggttgccgtt
aatcgggaaacgacgctgattcaacgtctaatggccgtttttaatccatcaccggctgac
aacgttgaaaaggcagataatatttcagaaaaaaagggaacttatgaatctgatactatt
ttaacaacagacctaataaatagtggaaagattgatccaatgattggaatgggtgaaatt
acaccgtcatctttttaa
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