Liquorilactobacillus mali: LM596_11160
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Entry
LM596_11160 CDS
T06815
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lmal
Liquorilactobacillus mali
Pathway
lmal02020
Two-component system
lmal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LM596_11160
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LM596_11160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmal03021
]
LM596_11160
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lmal02035
]
LM596_11160
Transcription machinery [BR:
lmal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LM596_11160
Bacterial motility proteins [BR:
lmal02035
]
Flagellar system
Flagellar assembly proteins
Stator
LM596_11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_20
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QFQ75615
LinkDB
All DBs
Position
complement(2296114..2296827)
Genome browser
AA seq
237 aa
AA seq
DB search
MYETSPEDEVLKYLPLVEKVAKRVPLKSTEYEYSDYYNIGVIGLIDALHKFDAAKKVPFE
SYAAIRIRGAIIDEVRKHSRISRYKMVAINDFYKAKQLLEQDHKREVTDSEICKNMGISI
TQLNEIYENIHYLASISLEGTIFPTEGAGGVSLGDVIPDNDGTNAEQKLIGEERKAALTR
CIQKLNEREQLILSLYYKEEATLKEIAAILDISIARVSQIHGKVIAKLKILMEDELS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaactagtcctgaagatgaagttttgaaatatcttcctttggttgaaaaagtt
gctaaaagggttccgcttaaaagtactgagtatgaatacagtgactactataatattggt
gtgataggcctgattgatgctttacacaagtttgatgcagcgaagaaagttccttttgag
agctatgcagcaatcagaattagaggtgcaatcattgatgaagttcggaagcattcaaga
atttcgagatataagatggttgcgattaacgatttctacaaggcaaaacagcttcttgaa
caagaccataaaagagaagtcactgatagtgaaatctgcaaaaatatgggaatatctatt
acacaactgaatgagatatatgaaaacattcattatttggctagtatttccctcgaaggc
actatctttcccacagaaggagcaggtggggtttcactaggagatgttattcctgacaac
gatggaactaacgctgaacagaaattaattggagaagaacgtaaggctgcacttacaaga
tgtatacagaaactaaatgaacgtgaacagttaattttgagtctgtactataaggaagaa
gccactttgaaagaaattgctgctatcttagatatctcaatagcaagggtctcacagatt
catggaaaagtaattgcaaagctaaaaatattgatggaggatgaattgtcatga
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