Listeria marthii: LAX80_001245
Help
Entry
LAX80_001245 CDS
T07828
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmar
Listeria marthii
Pathway
lmar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAX80_001245 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmar03021
]
LAX80_001245 (rpoC)
03400 DNA repair and recombination proteins [BR:
lmar03400
]
LAX80_001245 (rpoC)
Enzymes [BR:
lmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAX80_001245 (rpoC)
Transcription machinery [BR:
lmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAX80_001245 (rpoC)
DNA repair and recombination proteins [BR:
lmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAX80_001245 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UHP10440
LinkDB
All DBs
Position
258990..262595
Genome browser
AA seq
1201 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
SCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVMDM
SPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYREKYGKGFSAGMGAEAIKKILA
DIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRNSGNNPSWMVLDVLPVIPPEIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGRGLAHNIKSAKRKIERMAPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREKAVGEGTIFKDINEAQLAYQNGYVHLHSRIAVF
AGSIPNERFTDEQRNQLLITTVGKLIFNTILPKSFPYINEPTKFNLEIETPAKYFVDTTT
DVRAHIAAQELIDPFKKKILGNIIAEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGI
ADILTLEEKHEILEKAHDTVEKITKSFRRGLITDDERYERVIAVWNAAKDEIQGKLILSL
DRLNPIFMMQDSGARGNISNFTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFIST
HGARKGLTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLE
ERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCK
KCYGKNLATGTEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIITEVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVER
GEALTEGSVDPKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
MDTGDTNILPGTLMDIHTFTEANREAILSGSQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITN
I
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgttaataattttgagtatatgaaaatcggtctggcatctccagataaaatt
cgttcatggtctcatggtgaagtaaaaaaacctgaaaccatcaactacagaacgcttaaa
cctgaacgtgacggcttattctgtgaaagaatttttggaccaatgaaagactgggaatgt
tcttgtggtaaatacaaacgtgttcgctataaaggcgtagtttgtgaccgttgtggagta
gaagtaacgaaatcaaaagtccgtcgtgaacgtatgggccatattgaactcgcagctcct
gtttctcacatctggtacttcaaaggaattccaagccgtatgggtcttgttatggatatg
tccccacgtgcattagaagaaattatctactttgcatcctacgtggttacagaaccaggc
gatactccacttgaaaagaaacaacttttatctgaacgtgaataccgcgtttatcgcgaa
aaatatggtaaaggtttctcagctggtatgggcgcagaagctatcaaaaaaatcttagcc
gatatcgacttagaaaaagaaacaaatgatttaaaagaagaactaaaatctgcacaaggt
caacgtcgtactcgtgcgattcgtcgtttggaagttatggaagctttccgtaattccggc
aacaacccaagctggatggtacttgacgtgctaccagttatcccaccagaaattcgtcca
atggtacaacttgaaggtggccgttttgcaacaagtgatttgaatgacttatatcgtcgg
gtaatcaaccggaacaaccgtttgaaacgcctacttgatctaggtgcaccaaacattatc
gtgcaaaatgaaaaacggatgctacaagaagctgtcgatgctctaatcgataacggtcgt
cgtggtcgtccagtaacaggtccaggtaaccgtccgcttaaatccctttctcatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgtcgattattctggt
cgttccgttatcgtagttggacctaacttaaaaatgtaccaatgtggtcttccgaaagaa
atggcgcttgaattattcaaaccatttgttatgaaagaactagttggacgcggcttagca
cacaacattaagagtgctaaacgtaaaatcgaacgcatggctccagaaatctgggacgta
ttagaagaagttatccgtgaacatccggtattacttaaccgggcgcctacgcttcacaga
cttggtattcaagcatttgaaccaactctagttgaaggtcgcgcaatccgtcttcaccct
cttgtatgtacagcttacaacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatccgcagaagcacaagcagaagcacgtattttaatgcttgcagctcaaaacattttg
aaccctaaagatggtaaaccagttgtaacaccttcccaagatatggtgctaggtaactac
taccttactttagaacgtgaaaaagctgtcggcgaaggtactatcttcaaagatatcaat
gaagcacaacttgcgtatcaaaatggctatgtacacttacactctcgtattgctgtattt
gctggttcgattccaaatgaacgtttcactgatgaacaacgcaatcaattattaattacg
actgttggtaaattgattttcaacacaatcttaccaaaatcgttcccttatattaatgaa
ccaacgaaattcaacctagaaatcgaaacaccagctaaatatttcgttgatacaacaact
gatgttcgtgctcatattgcggcacaagaactaatcgacccattcaagaagaaaattctc
ggtaacattatcgcagaagtcttcaagaaattccatattaccgaaacttcaaaaatgctt
gaccgtatgaaagatcttggtttcaaaatctcgactaaggccggcatgacagtaggtatt
gcggatatcttaacacttgaagaaaaacatgaaattcttgaaaaagcacatgatacagtt
gaaaaaatcactaaatcattccgtcgtggtttgattacagatgatgaaagatacgaacgc
gttatcgctgtatggaatgctgccaaagatgaaatccaaggaaaactgatcttgagtttg
gatcgcttaaacccaatcttcatgatgcaagattccggagctcgtggtaacatttccaac
tttacacagcttgctggtatgcgtggactgatggctgacccatccggacgtatcgtagaa
ttaccgattacatctaacttccgtgaaggtttaacggtcttagagtacttcatttctacc
catggtgcgcgtaaaggtcttaccgatacagcccttaaaacagccgattccggttacctt
actcgtcgtcttgttgacgtggctcaagatgttatcattcgtgaagacgattgtggcact
gaccgcggtcttacaattaaggcaattcgtgaaggtactgaaatcatcgaaccacttgaa
gaacgtctggaaggtcgttattctcgtaaaacaattcgtcacccagaaacaaaagaagtt
attgcacgtgaaaatgacttaattacagaagcaattgcaactcaaatcgttgacgctgga
attgaagaagtaactattcgttctgcattcacatgtaatactaaacacggcgtatgtaaa
aaatgttatggtaaaaacttggcaactggtacagaagtcgaagttggagaagcagttggt
atcatcgctgcccaatctatcggggaaccaggaactcagcttactatgcgtactttccat
acaggtggggttgccggagacgatatcacgcaaggtcttccacgtattcaagaaatcttt
gaagcacgtaatccgaaagggcaagctatcatcactgaagttggcggtgaagttgtttct
atcgaagaaggtcgtgatcgtcaacaagaaatcactatccaaggtacagatgaccgccgt
tcttacaacattccttacactgctcgcttacgtgtagaagaaggaactattgttgaacgt
ggggaagctctaactgaaggttctgtggatcctaaagccttgattcgtgttcgtgacgta
ttatccgttcaagaatatctacttgcagaagtacaaaaagtttaccgtatgcaaggggta
gaaattggcgataaacacgttgaagtaatggttcgtcaaatgttacgtaaaatccgcgta
atggatactggtgatacaaacatcttaccaggtacattaatggatattcatacgtttaca
gaagccaaccgtgaagctatcttaagtggtagccaaccagcaacaggtcgtccagttctt
ctagggattacaaaagcttcccttgaaactgattccttcttgtctgccgcatcattccaa
gaaacaactcgtgtcttgacagatgctgcaatcaaaggtaaacgtgacgaacttctagga
cttaaagaaaatgttatcctaggtaaacttgttccagctggtacaggtattggtcgttac
cgcaaactgaaatccgaagttatcaaggaaacagctgaagtaactgacgaaatcacaaat
atttaa
DBGET
integrated database retrieval system
