Listeria marthii: LAX80_006025
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Entry
LAX80_006025 CDS
T07828
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lmar
Listeria marthii
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmar03032
]
LAX80_006025 (topA)
03400 DNA repair and recombination proteins [BR:
lmar03400
]
LAX80_006025 (topA)
Enzymes [BR:
lmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAX80_006025 (topA)
DNA replication proteins [BR:
lmar03032
]
Prokaryotic type
DNA Topoisomerases
LAX80_006025 (topA)
DNA repair and recombination proteins [BR:
lmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAX80_006025 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Lar_restr_allev
JHBP
DUF2996
Toprim_2
zinc_ribbon_4
Toprim_3
HypA
Motif
Other DBs
NCBI-ProteinID:
UHP11329
LinkDB
All DBs
Position
1192685..1194763
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKLSTADDVKEVMSAIKGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEAGNYIKATYGSEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQEVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEDYFPEILDVKFTANMESELDEVEHGE
VEWVKVIDEFYKRFEPNVIRADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERPC
PKCNKRALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacgattgaaaagtat
ttaggcaagaaatttaaagtaaaagcttccatgggacacgttcgagatttacctaaaagt
caaatgggtgtcgacacagaacatgactatgaacctcgttatattacgattcgcggaaaa
ggtcctgttttaaaagaattaaaacaagcggcaaaaaaagcgaaaaaagtctatctcgca
gccgatccagatcgcgaaggagaagccattgcatggcacttagccaacagccttgagtta
gaccaatcagataaattacgagtagtgtttaacgaaataacaaaagaagcagtaaaagaa
tcttttaaaacaccacgcaaaattgacatggatttagtaaatgcccaacaagcgcgtaga
attttggaccgtttagttggttataatatcagtcctattctatggaaaaaagtaaaaaaa
ggtttgagtgctggtcgtgttcaatcaattgcgttaagaatcattattgatagagaaaaa
gaaatcaataatttcaaacccgaagaatattggactattgatggaaacttccttaaaggt
aagaagaaattccaagccaatttttatggtgtgaatggtaaaaagaaaaaactttccaca
gcagatgatgtcaaagaagtaatgtctgcaattaaagggaaatcattcgatgtaacggat
gtaacgaagaaagaacgacttagaaaccctgctgcaccgtttactacttccagcttacaa
caagaagcagcgcggaaattaaattaccgtacaagaaaaacaatgatgcttgctcaacaa
ttatatgaaggaatcacacttggtaaacaaggaacagtcggtttaattacgtatatgcgt
actgactccactcgtattgccgattccgctattttagaagcaggtaattatattaaagca
acttatggatccgaattttctcgtaatcataaacgttcagataaaaatgcaaaaggcgca
caagatgcccatgaagcaatcagaccgacaagtgcgatgagaagtccgcaagaagtaaaa
gaatatttaacgcgagatcaactgcgcttatatcgtttgatctgggaacgatttattgct
agccaaatgacgccagcagttcttgatacgatgcgtgttgatttggataacaatggtgtt
aactttagagcaaatggttcaaaaattaaattccatggttttatgaaagtctacgtagaa
agtaacgatgataatacggaagaaaaagaaaatattctgccggatttgaaaaagggagat
aaggtgcagtccgaatcactcgaacagcgtcaacatttcacgcagccacctccacgttat
acagaagctagactagtaaaaacattagaagaaattggtattggtcgtccatcgacttat
tcgccaacacttgatactattcagcgcagaaattatgtttctttaactaataaacgattt
atcccaacggaacttggtgagattgttaatgaaatgattgaagactatttcccagagatt
ttagacgtgaagttcactgccaatatggaaagcgagcttgatgaagtagagcacggcgaa
gtggaatgggtcaaagtaatcgatgaattttataaacgatttgagccgaatgtcattaga
gcagatgctgaaatggaaaaaatcgagattaaagatgaaccagctggtatcgactgcgat
ctttgcggggcacctatggtatataaaatgggtaaatacggtaagtttcttgcttgtagc
agattcccagattgtcgaaatacaaaagcaatcgttaaagaaatcggtgttacttgtcca
aaatgtgagaaagggcatgtaatagaaagaaagagcaagaaaaaacgaattttctacgga
tgtgatcgttatccagattgtgattacgtttcatgggataaaccggtagaacggccttgt
ccgaaatgtaataagcgagcacttgtcgagaagaaattgaaaaaaggcgtacaagtacaa
tgtacaaattgtgattacaaagaatcaacacaacaataa
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