Listeria marthii: LAX80_006310
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Entry
LAX80_006310 CDS
T07828
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lmar
Listeria marthii
Pathway
lmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAX80_006310 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmar03019
]
LAX80_006310 (pnp)
03016 Transfer RNA biogenesis [BR:
lmar03016
]
LAX80_006310 (pnp)
Enzymes [BR:
lmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LAX80_006310 (pnp)
Messenger RNA biogenesis [BR:
lmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LAX80_006310 (pnp)
Transfer RNA biogenesis [BR:
lmar03016
]
Prokaryotic type
tRNA degradation factors
LAX80_006310 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
RNase_II_C_S1
OB_RRP5_4th
KH_2
S1_2
SPATA25
S1_RRP5
RICTOR_M
CvfB_2nd
MUG2_C
Motif
Other DBs
NCBI-ProteinID:
UHP11383
LinkDB
All DBs
Position
1257629..1259800
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AA seq
723 aa
AA seq
DB search
MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAAVGSKKPRPGDFFPLTV
NYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLFAEGFRNEVQITSTVFSVD
QDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKYVINPTIEQAEKSDISLTVAG
TYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQQQIIAAVGKEKREIELFVSDPE
LEAEVKAASEGKMKTAIKTEEKKAREAAIDDVKEEILESYKAKELENESEILSEVAHILE
MIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVGMLPRVHGSGLFTRGQTQALSVCTLAP
LREHQIIDGLGTEEYKRFMHHYNFPQFSVGETGPRRAPGRREIGHGALGERALQYVIPSE
EEFPYTIRLVSEVLESNGSSSQASICGSTLAMLDAGVPIKAPVAGIAMGLVKLGDDYTIL
SDIQGMEDHFGDMDFKVAGTKDGITALQMDIKIDGLSRQILDEALTQAKEGRLHILEHLT
STISAPREELSAYAPKIITLNIKPEKIKDVIGPGGKQINAIIEETGVKIDIEQDGTVYIA
SQDQAMNRKAIAIIEDIVREVVVGEVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHER
VGKVEDILKLGDEVTVKVIEVDQQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKP
ESK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacaagtgttttcaacagaatgggcaggtaaaacattatctgttgaagta
ggtcaattagcaaaacaagcaagtggggcagcattaattcgttatggtgatactgtcgtt
ttaacagcagcagtaggttctaaaaaaccacgtccaggtgactttttcccactaacagtt
aactatgaagaaaaaatgtattccgttggtaaagttcccgggggattcttaaaacgtgaa
ggacgtccaagcgaccgtgcaacattaactgcacgcctaattgaccgtccaatccgtcca
ttatttgcagaaggtttccgtaatgaagttcaaattacttctactgttttcagtgtggat
caagattgttctccagaaatggcagcaatgcttggatcttctgtagcattagttatttct
gatattccatttgaaggaccaatcgctggtgttgacgttggtcgtattgacgggaaatac
gttattaacccaacaatcgagcaagcagaaaaaagcgatattagcttaactgttgcagga
acttatgatgctatcaacatggtagaagctggagcgaaagaagtttcagaagaagccatg
ctagaagcaatcatgtttggtcacgaagaaattaaacgtctttgtgaattccaacaacaa
atcatcgctgccgttggtaaagaaaaacgcgaaatcgaactttttgttagcgatcctgaa
cttgaagcagaagtaaaagcagcaagtgaaggtaaaatgaaaacagctatcaaaacagaa
gagaaaaaagcgcgtgaagctgcaattgatgatgtaaaagaagaaattttagaaagctat
aaagcaaaagaattagaaaatgaatctgaaattcttagcgaagtagctcatattcttgaa
atgattgaaaaagacgaaatgcgtcgtctaatttctcaagataaaatccgtccagatggt
cgtaaagtaaacgaaattcgcccgctttcttctgaagttggcatgcttccacgtgtccat
ggttctggtttattcactcgtggccaaacacaagctctaagcgtatgtactctggcaccg
cttcgtgaacaccaaatcattgatggtctaggaacagaagaatataaacgctttatgcac
cattacaatttcccgcaattcagtgttggagaaactggtcctcgtcgtgccccgggtcgt
cgtgaaatcggtcacggtgcattaggtgaacgtgcattgcaatatgttattccttccgaa
gaggaattcccatacacaatccgtttagtatcagaagttcttgaatctaacggatctagc
tctcaagcaagtatttgtggttctacacttgcaatgcttgacgctggtgttccaattaaa
gcaccagttgcaggtatcgcgatgggtcttgtaaaacttggcgatgactacacaatcctt
tctgatatccaaggtatggaagatcactttggcgatatggactttaaagttgctggtaca
aaagacggtattacagcacttcaaatggacatcaaaatcgatggcttgagccgtcaaatt
ttggacgaagcattaacacaagcaaaagaaggacgcttacacattctagaacacttaact
agcacaattagcgcacctcgtgaagaactttctgcttatgctccaaaaattattacactt
aacatcaaaccagagaaaattaaagatgttatcggacctggtggaaaacaaatcaacgca
atcatcgaagaaactggcgtaaaaattgatatcgaacaagatggtacagtttacattgct
tcccaagatcaagcaatgaaccgtaaagctattgccatcatcgaagacatcgttcgtgaa
gtagtagtcggagaagtttacactggtaaagttcgtcgtatcgaaaaatttggcgcattt
gttgaattattcaaaggtacagacggtttagtccatatctctgaattagcacatgaacgt
gttggtaaagtagaagatatccttaaacttggcgatgaagttactgttaaagttatcgaa
gtagaccaacaaggtcgcgttaacttatcacgtaaagctttgcttgagaaaaaagaacaa
ccagaaggcgacaaaaagccacaagcagagaaaaaattctacccaaaaacgaaaaaacca
gaatctaaataa
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