Listeria marthii: LAX80_006910
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Entry
LAX80_006910 CDS
T07828
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lmar
Listeria marthii
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmar03019
]
LAX80_006910 (cshB)
03009 Ribosome biogenesis [BR:
lmar03009
]
LAX80_006910 (cshB)
Enzymes [BR:
lmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LAX80_006910 (cshB)
Messenger RNA biogenesis [BR:
lmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LAX80_006910 (cshB)
Ribosome biogenesis [BR:
lmar03009
]
Prokaryotic type
rRNA helicases
LAX80_006910 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UHP11565
LinkDB
All DBs
Position
complement(1379605..1380912)
Genome browser
AA seq
435 aa
AA seq
DB search
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFI
LPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAID
KLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPAN
LQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKIDLLKNVL
VGSQPYLAIVFTNTKTTADEVANGLVERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVV
ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL
EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN
YKMNEIKRRERRKKR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaatcaaggtttgaccaattcggctttcaaccttttattggacttgcaata
gataaattaggattctatgagccaacagaagtacaacagaagctaatcccaggcatttta
aaaggtgaaagtatcattggacaatctcaaacaggtacagggaaaacccatacttttatt
ttgccaattattaacaatgtgaatcctgaaaaagatgcagtacaagctgttattacggca
ccaagtcgtgagcttgctactcaaatttataatgaaattcgcaaagtaacgaaatacagt
gaaaaagaaatcgctgtacagcttgttattggtggtacggacaaacaacgtgcgatcgat
aaactaaaaaaacaaccacaaattattgtcggaacgcctggtcgtatcaatgacttaatc
cgcgaacaagctttatttgttcatacagcgaaaacactagttattgacgaagcagacatg
acgcttgatatgggcttcttaaacgatgtcgaccatatcgctggaaaaatgccagctaat
ttacaaatgcttgttttttccgcaacaattccgcaaaaattaaaaccatttttaagcaaa
tatatggaaaatccgcgttatgagcatatccaaccaaaagtggctgcttcaaaaacagtg
gaacaccgtattatggccactcgtagccgtaacaaaatagatttacttaaaaatgtttta
gttggttcgcaaccttatttggcgattgttttcactaatacgaaaacaacggctgatgaa
gtagcaaacggattagttgaacgtggacttaaagtagccaaaattcatggcgatgtcaac
ccacgtgaacgtaaacggacaatgaaacaaatcgaaaacttagattatcaatatgtggtt
gcgacagatttagctgctcgtggtattgatatccaaggaattagtcatgttgtaaactat
gaattaccggatgacttagatttctacattcaccgtacaggccgaactggtcgtgccgga
cattctggtatcgcccttactttatttgaaccagctgacgaagatcgtctaaaccaactg
gaaaaaatgggtattgagtttaagcacgttgactggaaaaataaagaattcgttacacta
gaagaccgcaaccgtcgtgcaaaacgtgaagcaaaacgcgaaacagcggatccacgtgaa
atcggtatgcgtaaaaaagcaaaacaaaaaggtaaaccaaactataaaaagaaaattaac
tacaaaatgaacgaaattaaacgtcgtgaaagacggaaaaaacgataa
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