Listeria marthii: LAX80_007495
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Entry
LAX80_007495 CDS
T07828
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmar
Listeria marthii
Pathway
lmar03030
DNA replication
lmar03410
Base excision repair
lmar03420
Nucleotide excision repair
lmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAX80_007495 (polA)
03410 Base excision repair
LAX80_007495 (polA)
03420 Nucleotide excision repair
LAX80_007495 (polA)
03440 Homologous recombination
LAX80_007495 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmar03032
]
LAX80_007495 (polA)
03400 DNA repair and recombination proteins [BR:
lmar03400
]
LAX80_007495 (polA)
Enzymes [BR:
lmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAX80_007495 (polA)
DNA replication proteins [BR:
lmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAX80_007495 (polA)
DNA repair and recombination proteins [BR:
lmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAX80_007495 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAX80_007495 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
LTD
Enkurin
NYN_YacP
HHH_2
DUF5094
Motif
Other DBs
NCBI-ProteinID:
UHP09048
LinkDB
All DBs
Position
complement(1500576..1503203)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPLQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEEVKELKELS
FEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTIHSSQGTYFFTKETAENSTAFREW
VESEQTKVVYDAKKTMVAMNRIGLAIAGISFDIMLASYLLNPSDSIDDFTSVAVRHDYTE
VETDEAVYGKGAKRSTPEESIVAAHLSRKVVAIADLEKRLIDDLEKNEQLALMEDLELPL
TFVLAQMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDCAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaatcgatggaaatagtatcgcgaatcgcgcgttttatgcgtta
ccgcttttaaataacgacaaaggtgtttatacaaatgcagtgtacggctttgcaatgatg
ttaatgaacgtgctggaaaaagagaaaccgagccatgtgttggttgcttttgatgctggg
aaaaccactttccgtcatacgacatttaaaggttacaaaggcggacgtcaaaaaacgcca
agtgaattgtccgagcaatttccatttatccgagagcttttaacagcttacgatatccca
caatatgaacttgccaactacgaggcggatgatattatcggaacattaacgaaaaaagca
gaagcggacgggatggaagtagccatcattaccggagaccgcgatttaacgcaactagct
tctgaaaaaacaacggtctatatcacgaaaaaaggtatagccgatatggaaacgaacacg
ccagaaacgttaaaagaaaaatacaatctaaccccactccaaattattgatatgaaaggg
ttaatgggtgattcatctgataatattccgggcattcctggcgttggtgaaaaaacagcc
ttaaaactgttgcatgaatttggtggaactgtagagagcgtactggaacatgccgaggaa
atttctggtaaaaaactaaaagaaaaagtactggaaaataaagaattagctattttaagt
aaagaactagctacaattaatgtggattcaccaatcgaatgcactgttgaaagtacgaaa
tacgacggctaccaaacggagaaagtaattccacttttaaaagaaatgaactttacgaca
ttgttgaaaaacatcgaaggcgatacgccagaagaagtgaaagaactaaaagaattatct
tttgaaatagtaacggaattaaaagaacagcattttggtgggaaaacggcactttatgtc
gaattagaaaatgataactaccatacagcgaattttattggattaacgattcattctagc
caagggacctatttctttaccaaggaaactgctgaaaatagcacggcattccgtgaatgg
gtggaaagtgaacaaacaaaagttgtttatgacgcgaaaaaaacgatggttgcaatgaac
cgaattggacttgcaatagcaggcatctcatttgatattatgctagcttcctatttgtta
aatccatctgactctattgatgattttacaagcgtagcagtgcgtcatgactatacagaa
gtagaaacagacgaagcagtttacggaaaaggtgcgaaacgaagcacaccagaagaaagt
attgtagcagcgcatctttcaagaaaagtagtagcaattgctgatttagaaaaaagactt
atcgatgatttggagaaaaacgaacaattagccttgatggaagatttagagctaccttta
acatttgttttagcgcaaatggaaatgcagggggttagtgtcgacacagaacgccttgaa
aatatgaaagtagaactagcgggtagattgaaaacattagaagagtcgattcattcacta
gctggcgaagaattcaacatcaattcaccaaaacaactaggtgtaattttatttgaaaaa
ctggaactgccaccagtcaagaaaacaaaaacaggttactcaacagccgcagatgtatta
gaaagtttatctggcaaacatgcgattattgatgaaatcttgctatatcgccaacttggt
aaaatccagtccacttatatcgaagggttgcttaaagtaacagacaaagaaacgcataaa
gtccatacacgttttaatcaaacgttaacacagactggtcgtttaagttcggttgatcca
aatctccaaaatatcccgattcgcttagaagaaggtcggaaaattagacaagtatttgtg
ccaagtaagccgggctggaaaatgttttctgccgattattcgcaagtagaattacgtgtt
ttagcgcatatttcagaagatgagaatttaatttatgcttttaaacacgattatgatatt
catacgaaaacagcgatggacgtttttcatgtggagcaagaagaagtggattcactaatg
cgtcgtcaagcaaaagcagtaaactttggtattgtatacggtattagcgactacgggctt
tctcaaaaccttggaattacccgaaaagaagcgaaagactttattgatcgttattttgtg
agttatcctgccgtaaaagaatacatgcaagatatcgttcgttttgcgaaagaaaaaggc
tatgtggagaccattttacatcgtcgtcgttatattccggagattgttagccgtaatttt
aatgttcgcggatttgcagaaagaacagcgatgaacacgccaatccaaggtagtgccgct
gacattattaaaaaagcaatgattctgatgagcgagcgtttagtatccgaaaaattagaa
gcaaaattattacttcaagtacacgatgaattgattttcgaagcacctgaagccgaaata
gctaaattagaagaaattgtcccagatgtaatggaaaatgctgtagaactttctgtccca
ttaaaagtagattgcgcatttggtgacacgtggtatgatgcgaaataa
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