Listeria marthii: LAX80_007540
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Entry
LAX80_007540 CDS
T07828
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmar
Listeria marthii
Pathway
lmar03030
DNA replication
lmar03430
Mismatch repair
lmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAX80_007540 (dnaE)
03430 Mismatch repair
LAX80_007540 (dnaE)
03440 Homologous recombination
LAX80_007540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmar03032
]
LAX80_007540 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmar03400
]
LAX80_007540 (dnaE)
Enzymes [BR:
lmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAX80_007540 (dnaE)
DNA replication proteins [BR:
lmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAX80_007540 (dnaE)
DNA repair and recombination proteins [BR:
lmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAX80_007540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Transcrip_reg
DUF655
Imm58
DUF3801
Motif
Other DBs
NCBI-ProteinID:
UHP09057
LinkDB
All DBs
Position
complement(1512254..1515580)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIVGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSWLRAYSS
DLIAISPGAKGEVERLLMEENREGALEAYGNLVEIFGKESVYFSAQKENPRLFAKIEAFS
AEENVPVVATKNVQYMEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQDEMERDWQ
TDFEKRACLETGLLADRCHVEIALDQHLLPRFPLNEAQNASEVLRQTAYEGLKERDLLAE
EYQARLDYELKVITEMGFADYFLIVWDVIRYSREAGILTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWDVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYAKERPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSESSANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHYPAAFMSSLLSSVFGNDDKISQYITEAKNYGINM
LAPSINHSNYYFQMENETSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLTETVLEALVFSGCFDEFGEDRATIQATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLSITRLASIASGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDESKELSAVMFPESYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQVKPVLARYKGDSKVIVHQAITKQTTE
LKNIQVTPSNELQEALVALLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgttcatttacaggttgcgagcgcttatgatttgctatctagtacagcatcc
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattgtcgggatgacggtgacaatacaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcacgagttattaaaaatcgcaagtgcc
attcaaacgcgcgaagaaggaccggaattaccacaaagttggctacgggcttacagcagt
gacttgattgccatttcaccaggcgccaagggggaagtggaacgtcttctcatggaggaa
aaccgcgaaggagcactggaagcttatggaaatttagtcgagatattcggcaaagaatcg
gtttatttttccgcacaaaaagaaaatccacgcctttttgcaaaaatagaagcattttct
gctgaagaaaatgtccctgttgttgcgactaaaaacgtgcaatatatggaaccaaaagat
gcgcaagcgaaagaagtattgacagcaattcgtgataatcgcacagtcgactggacgact
ttaccacttgcaggaccgaactattttacctcgcaagatgagatggagcgggactggcaa
acggactttgaaaaacgagcgtgtcttgaaactggcttgttagctgaccgttgtcatgtg
gaaattgctttagatcagcatttgctaccaagatttccattaaatgaagcgcaaaatgca
tccgaagttttacgtcaaacagcatatgaaggcttaaaagagcgagatttattagcagaa
gaatatcaagcacgtttagattatgaattgaaagtcattacggagatgggctttgcggat
tatttcctaatagtttgggatgtgattcgttattctcgtgaagcggggattttaacgggg
ccaggtcggggttctgcggcagggtcacttgtttcctatgcgcttagaattaccgatgtg
gatccaattcgttacaatttgctattcgaacgatttttaaacccagaacggataacgatg
cccgatattgacttggatttccctgataatcgccgggatgaagtgatttcgtatgttgta
tctaaatacggcgaggcgcatgtggcgcaaatcggcacatttggaacattagctgccaaa
gctgctattcgtgatacagcgaggagttttggcttgaattccgtgcttttatcggaatgg
tccaagctaatcccgagccaattaggcattacattacaaaaagcattgcaagaaagcccg
cgcttagaaaatcatattaaaagttccaaagaaaatgaaatgatttgggacgttgcctgc
caactcgaaggcttaccacgccatatttcgacgcacgccgccgggattgttattagtgac
aagccgctagttgaacaagtcgcgctgcaattaggtagcggagacgcgcgactgacccaa
tttgccatgggagaattagaaaaaatcggcttacttaaaatggattttcttggacttaga
aatcttagtttgttagatcgtgtgttgaaatcggttaattatgcgaaggaaagaccgtta
acattagcggatatttccttagaagataaaaaaacgttaaaactattccaaacgggtgat
acgaccggagttttccagtttgaatcagatggaattcgtcgcgtgctccgaaaattaaaa
ccaacttcttttgaagatgtggtggcggtagatgcactttatcgtcccggtccaatggaa
caaattgatacgtttattgctagaaaacatggaaaagaaaaaattcagtatccgcatccg
gatttggcgccaattttagaagtaacttacggcgttattgtctaccaagaacaaatcatt
caagtcgcgaaccaaatggccggattttcacttggagaagccgatttattaagacgagcg
gtcagcaagaaaaaagcggacgtcctaaacgaagagcggattcattttgttgaaggggct
aagagtaaaggctattcagaaagtagtgcgaaccaagtatacgacatgattgtccaattc
gcgaactacggtttcaaccgaagtcacgcagcagcttattcaaaaattgccttccaattg
gcatatctaaaagcgcattatccagcagcatttatgtcgtcgctccttagttctgttttt
ggtaatgacgataaaatttctcagtacattacagaagctaaaaactacggtatcaacatg
ttggcgccaagcatcaatcatagcaattactatttccaaatggaaaatgaaacatccatt
cgttatagtttccgcgttattcgcaaagtcccaacaaaatttattttagaaatcatcaac
gaacgaaaaaaagcaccattccgagatttctttgatttttgcgaacgaatgccacataaa
atgctcacagaaacagtgttagaagcgcttgtattttccggttgttttgatgaatttggc
gaagatcgggcaacgattcaagcgacaattgatgcggtattacaatacatttcgttgctc
ggggaagactccaagggcatgaatcttttcgcggaagatgacgaattcttgaaaaagatg
aaaccacgataccggaaaaccgcgccaatttcgattgatgaaaagcttgaaaaagaaaaa
ttatacacaggtcaatacgtttcagcgcatcctgtatcatattaccaaaacaaactgcaa
aacctttctatcacaagacttgcgagcattgcttcgggcaaaaattatcaagtggcagcc
tacgttcacgaagtaaaatcaatcagaacgaaaaaaggcgaaacgatgtgctttttaacg
attagcgatgagtctaaagaacttagcgcagtgatgttcccggaaagctaccgtaaattt
gctaactttgcccaaaaaggggagattctctttttacaagttaaagcagatacgagaaac
ggtgaactccaattaattattaataaagccgaagatttaaaagaaattaaagcgccagtg
agactatttttaaaattaacagaaccacagcaaatggagcaagttaagccagttttagcg
cgctataaaggcgatagtaaagtcatcgttcaccaagcgataaccaagcaaaccaccgag
ttgaaaaatattcaagtaacaccatcaaatgagttgcaagaagcgctagtggcgttgctt
ggcaaagagaatgtcgtaattaagtga
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