Listeria marthii: LAX80_008600
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Entry
LAX80_008600 CDS
T07828
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmar
Listeria marthii
Pathway
lmar03420
Nucleotide excision repair
lmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAX80_008600 (pcrA)
03430 Mismatch repair
LAX80_008600 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmar03400
]
LAX80_008600 (pcrA)
Enzymes [BR:
lmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAX80_008600 (pcrA)
DNA repair and recombination proteins [BR:
lmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAX80_008600 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LAX80_008600 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH_3
ResIII
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
UHP09239
LinkDB
All DBs
Position
complement(1728900..1731095)
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AA seq
731 aa
AA seq
DB search
MNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERSVNPYNILAI
TFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGGDQL
SVIKGILKEKNVDPKKFEPRGILASISNAKNELISASEYIKEASGFYDKMVGEVYEKYEK
KLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKQLASR
FKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVIEN
NGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSSRPLSDFAILYRTNA
QSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIVNVPKRGV
GPGTLDKLNNVATTYDLSLFEVLNRIELAGISPKISKDLVAFHDLVRGFTQMQDFLSVTE
LVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENDDKTLIAFLTDLALVA
DVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEDEMEEERRL
AYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPRDLLELGNENKIKTDKPYAKP
RMPQKATTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKR
LLAEFAPIEKV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgcaaaagaattagttgacggattaaatccagaacaacgcagagcagtagaaagt
acagaaggacctttattaattatggctggagccggaagtggtaaaacacgtgttttaacg
caccggatagcttatttagtgagagaacgtagcgtgaacccgtataatattttagcgatt
acgtttacgaacaaagctgcacgtgaaatgaaatcacggataggtaatttaatgggcgga
gaagcggaatcaatctggatttccactttccactcaatgtgcgtacgaattttacgtcga
gatattgatcgcattggctacgaacgcaatttcaccattttagatggtggcgaccaatta
tcggttattaaaggaatcttaaaagaaaaaaatgtcgatcctaagaaatttgagccacgg
ggtattttggcgtcaatcagtaatgccaaaaatgaacttatttctgcgagtgaatatatc
aaagaagcaagtggtttctatgacaaaatggtcggcgaagtctacgaaaaatacgaaaag
aaactcaaaaagaaccaagcgctcgattttgacgatttaattatggtgacgattcaatta
tttgaacgtgtaccggatgttttagaatactatcaacgcaagtttcaatatattcacgtg
gatgagtaccaagataccaaccacgcgcaatatttacttgtaaaacagcttgcttctaga
tttaaaaatttatgtgtcgttggtgactcggatcaatctatctatggttggcgcggggcg
gatattagtaacattatgtccttcgaaaaagattaccccaatgccaaaacgattttacta
gaagaaaattaccgttcgaccaaacgcattttagaagcagcaaaccgtgtcatcgaaaac
aacggtaatcgtaaaccgaaaaatctttggactagcaatgcggaaggtaagaagattttt
taccataaagcactcacggaaaaagaagaagcggcttacgttgttatgaaaattcaagaa
gaagtgaataactcaagtcgtccgctttctgattttgcaattctttatagaactaacgcc
cagtcccgtgtaatggaagaatatttcatgaagtccaatatggcttacacaatggtcggc
ggcacgaagttctatgacagaaaagaaattaaagacattttggcgtatttacgtctgatt
agtaataacgaagacgatattagtttgacacgtattgttaacgtaccaaaacgcggcgtt
gggccaggcacattagataagttaaataatgttgcgaccacctatgatttgagcttattt
gaagtgcttaaccgtatcgaattagcgggcatttctcctaaaataagcaaggatttagtt
gcgttccatgatttggtccgcggcttcacgcaaatgcaagatttcttatccgtaacggaa
ctagtagaagaaatccttgaaaaaacaggctaccgcgcgatgttgaaaaacgaacgtacc
atcgaagcgcaaacacgtttagaaaatatcgatgagtttttatctgtaacgcaaaacttt
gaaaaagaaaatgacgataaaacgttgattgcctttttaacagatttagcacttgttgcg
gatgttgataagttagaagaagataatgaagagcaaaacggagcagtcacactgatgacg
cttcactctgccaaagggctagaattcccggttgtctttttagttgggatggaagaaggg
attttcccacattccagagctatttatgaagaggacgaaatggaagaggaacgccgtctt
gcttatgttggtattacgagagcggaagaagaacttttcctaacgagcgcatattcacgg
atgctatacggtcgcccgtcatccaaccaagagtctcgtttcatcggagaaattccgcgc
gatttactagaattaggaaacgaaaataaaataaaaacagataagccttatgccaaacca
cggatgccgcaaaaagcaactactgcgtacaaatcctccggcgcggaaacacttggttgg
acagtcggcgataaagcgagccataaaaaatggggcgtaggaacagtcgtaagtgtcaaa
ggagaaggcagcggaatggaattagatatcgcattcccaagtccaactggcgtcaaacga
ttgctcgcagaatttgcgccaattgaaaaagtataa
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