KEGG   Listeria marthii: LAX80_012035
Entry
LAX80_012035      CDS       T07828                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
lmar  Listeria marthii
Pathway
lmar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LAX80_012035 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmar03400]
    LAX80_012035 (uvrB)
DNA repair and recombination proteins [BR:lmar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LAX80_012035 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LAX80_012035 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD P-loop_SecA HEM4 AAA AAA_7 AAA_30 AAA_19 UB2H AAA_22 DUF87 DUF5662 AAA_5 AAA_25 PMT2_N
Other DBs
NCBI-ProteinID: UHP09864
LinkDB
Position
complement(2403506..2405482)
AA seq 658 aa
MKDKFELVSKYSPQGDQPRAIEQLVAGLRKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATASLFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDELLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAVVNIKAELEDRLKVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATS
AADEREAVKQHDLSKMSKKERDVFIEGMEYEMKEAAKALDFERAAELRDALLEIKAEG
NT seq 1977 nt   +upstreamnt  +downstreamnt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagca
atagaacaattagttgcgggattaagaaaaggcttgaaacaccaaactttacttggtgca
accggtacagggaaaacttttaccgtatccaacgtgattcaagaagtaaataagccaaca
cttgtaatggctcataataagacgctggcaggtcagctgtatagcgaatttaaagagttt
tttccgaataatgctgtagaatattttgtcagttattatgactattatcaaccagaagcc
tatgttccacaaagtgatacgtacatcgagaaagacgccagtatcaatgatgaaatcgac
aagcttcgtcactcggctacggcctctctttttgaacgtcgcgatgtcattattatcgcc
agtgtgtcgtgtatttatggcttaggttcgccgattgaatacggagaaatgctcgtttcg
cttcgtgtcggtatggagattagtcgtgatgaattactgcgcaaattagtagatatccaa
tatgatcgaaatgatatagatttccaacgcggccgcttccgagttcgaggtgatgtggtc
gaaattttcccagcatcaagagatgaacattgtatgcggattgaatttttcggcgatgaa
attgaacgtattagagaagtagatgcgctaactggcgaaattatcggagaaagagaacac
gtctccattttcccagcgtctcactttgttaccagaccagatattatgaaaaaagcagtc
gttaatataaaagcagaactagaagaccgtctcaaagtattgcgtgcggacaataaatta
ctcgaagcgcaacgactggaacaacggacgaattatgatttagaaatgatggaagaaatg
ggctattgctcgggtattgaaaactattccagacatctatctcttcgcccagctggagtt
acgccgtatactttactggactatttcccagatgatttccaaatggtcatagatgagtcg
cacgtgacaatgccgcaaattcgcggaatgttcaacggagaccaagccagaaaacaaatg
cttgtcgatcacggttttagattgccaagtgctttagataaccgaccacttcgactagaa
gaatttgagaaacatatcaaccaaatcatgttcatatccgccacaccaggcccatacgaa
ctagaaaaaaatccagatgtcatcgaacaaatcattcgaccaactggcttgctagatcca
attgtagaaattcgcccaattcaaggacaaatcgatgacttaatggatgaaattaacgac
cgtgtcgagaaaaatgaacgcgtcttaattacaacgttaacgaaaaaaatgtccgaggat
ttaaccaactatctcaaagaagctggcgtcaaggtccaatatctacactcagaagtaaaa
acattagaacgaattgaaatcattcgcgatttacgacttggcgtgtatgacgttatcgtc
ggaattaacttgctgcgtgagggaatcgatttaccggaagtttcattggtagcaatttta
gatgcagataaagaaggtttcctacgttccgaacgttcgctcattcaaacaatgggacgt
gctgcgcgtaatgaaaatggtcgagtaatcatgtacgcagataaaatgactgactccatg
cgcaattccattggcgaaacagaacgtcgtcgtaaaatccaaatcgaatataatgaaaaa
catggaattacaccaaaaacaatcaaaaaagaaattcgtggtatcatcgcagcaacttct
gccgcagatgaaagagaagcagtgaagcaacatgatttaagtaagatgtctaagaaagaa
cgcgatgtattcattgaaggtatggaatatgaaatgaaagaagcagctaaagcacttgat
ttcgaacgcgctgctgaacttcgtgatgctttactggaaataaaagcggaaggatga

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