Levyella massiliensis: ACRQSI_03425
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Entry
ACRQSI_03425 CDS
T11823
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
Organism
lmas Levyella massiliensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
UB2H
RecG_dom3_C
AtTam9
Motif
Other DBs
NCBI-ProteinID:
XXI60511
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Position
740379..743891
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AA seq
1170 aa
AA seq
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MTKTDELFLLEPRFTRLLHELDGGKRRIHLHGLVPESTGPFVAALAAQRECPVFVVSESA
VKARAFTEELQNAGVARAYTYPEEELQFFKTDSTISPVSRQRLAVLQEVYAGGTMVVSTT
LSALKRRIVPPRRYAESVVTLAVDTSVSEEEVIRKLVAMRYVRTTSVEHAGEFSVRGDIL
DVFPPASKLPFRIEFFDTDIERIHSFEVETQRSVDPHEKILLTPAENLLFTDADCKDVLS
RMRVDLKQAEAVAKKHHLHPNLDKFYHLMDELETNNHVSNPDLAEAYLNDDSTAGLMDYL
PDDAVIVLDDISRILETEKRRDALALDTYTTLAEQSEILKAHLSHRLTITNVYEALGAYA
FVNLTQILKSVREFTPDALLQIRSMEAENFNNRWSEFTDALRWSQKQKKKIVLAVGSGKE
ALAERLLASDILFTNETSRTHLKDIKDGEILLSSLSLGHGFLLPDGNLHIISRTEILGKE
KKRKAVRRPRRKSDLLNYQDLAPGDYVVHEIYGIGEFLGTETIEYDGLKKDFIKISYKGA
DALYVPTDEMDLVTKYIGSGGPKPRISSLGGSEWKRSKEKARKAVDAIAEDLLELYAKRS
KVKGHAFAADSPWQQEFEESFLYEETPSQLRAAEEIKADMESSKPMDRLLCGDVGYGKTE
VALRAAFKAVMDGKQVAFLAPTTILVQQHYQTMMDRFLSYPMRIEFLSRFKSAEKQKAVV
KQIRQGSVDIVVGTHRLLSKDIQFKDLGLLIVDEEQRFGVKDKEKMKKIKENVDVLTLSA
TPIPRTLQLSLTGIRDMSLLEEPPEERYPTISYVMETDPVVLRDAIRRELDRNGQVYVVH
NRVHDIHFAYERLQALVPEARIVVAHGQMSIRELENVMEQFVSGEADILLATTIIETGMD
IANVNTLIVEQADRMGLSQLYQLKGRIGRSDRQSYAYFTYDRSKVLSEISEKRLKAIRDF
TEFGSGYKIAMRDLELRGAGNLLGESQSGHIESIGYELYVRMLEEAVSRAKGEAKTVHAG
DINVDVKVSAFIPDEYIPQSSDKIMMYRQIASIENEEEYSKIVEELLDRFGDPPESVENL
LDIALIKRWASDLGFSRIKETKEAIELRYEKFEQFSVEQLKAISEGYSGPLTFDFQKEPR
FKIAVSPHKLKDTKRLLQLMTQLKNREEKE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaccgacgaactgtttcttcttgaaccgcgttttactcgtctactgcatgaa
ctggacgggggaaaacgccgcatccatctgcacggattggtgccggaaagtacaggaccc
tttgttgccgcccttgcggcgcaacgcgagtgtcctgtttttgtcgtgtccgaatctgcc
gtaaaggcgcgtgcattcacggaagagttgcagaatgcgggtgttgcacgagcctatacg
tatcctgaagaagagctgcaatttttcaaaacggattcgacgatttcgccggtgtccaga
caacgtcttgctgtgttacaggaagtctatgccggtggcacaatggtcgtgtcaacgact
ctttccgctctgaaaaggcgcattgttccgccgcgtcgctatgcagagtcggttgtaacg
ctggccgtggacacttcggtttcagaagaagaagtgattcgtaaacttgtagccatgcgc
tatgtgcgcacgacttcggtcgaacatgccggtgaattttccgttcgtggcgatattctg
gacgtctttccgccggcatcaaaactgccgtttcgtattgaattttttgatacggatatt
gaacgcattcattcgtttgaggtggagacacagcgttcggtggatccgcatgaaaagatc
ctgttgaccccggcagaaaatttattattcacggatgcggactgtaaagacgttctctcg
cgcatgcgtgttgatttaaagcaagcagaagccgttgctaaaaagcatcatctgcatccc
aacttggacaagttttatcacctgatggatgaattggaaacgaacaatcacgtttccaat
ccggatttggcggaggcatatcttaatgatgactcgacggcgggactcatggattatctg
ccggatgatgcggtaatcgttcttgacgatatttcgcgtattttagagacggaaaagcgg
cgcgatgccttagccttggatacctatacgacgctggcagagcagtcggaaatcttaaag
gcgcatctgtcgcatcgtctcaccataaccaatgtatacgaagcccttggcgcctatgca
ttcgtgaatctgacgcagattctaaaaagcgtgcgcgaattcacgccggatgccttgctg
cagattcgcagtatggaggcggaaaactttaataatcgctggagcgagtttacggatgcg
ctccgctggtcgcagaaacaaaaaaagaagattgtattggcggtgggcagcggaaaagag
gctcttgcagagcggcttttggcgtccgatattctgtttacgaacgaaacgtcacgtacc
catttaaaggatataaaggacggggaaattcttctttcgtcgttgtcacttgggcacggt
tttctattaccggacggcaatcttcatattatttcgcgcaccgaaatactcggaaaagaa
aagaaacgcaaggccgtgcggcgtccccgtcgtaagagtgatctgctcaattatcaggat
ctggcgccgggggactatgtcgtgcatgaaatttacggcatcggtgaatttctggggacg
gaaaccattgaatatgatggtctcaaaaaggatttcatcaagatcagttacaaaggggcg
gatgctctttatgtgccgaccgacgaaatggatctggtcacgaaatatatcggcagtggc
ggacccaagccgcggatttcatcgctgggtggttcggaatggaaacgatccaaggaaaaa
gcgcgcaaagcggtggatgccattgcggaggatttattggaactctatgccaaacgttcc
aaagtgaaaggacatgcgtttgctgcggattcgccttggcagcaagaatttgaagaatcc
tttctgtatgaagaaacgccgtcgcagctgcgtgcggcggaagaaatcaaagcggacatg
gagagttccaaaccgatggatcgtttgctctgcggcgatgtcggctatggtaagacggag
gtagcgttacgtgcggcgtttaaagccgtcatggacggcaaacaggtggcatttctggcg
ccaacgacgattttggtgcaacagcattatcagacgatgatggatcgcttcctgtcctac
ccgatgcgcattgaatttttatcgcgctttaaaagtgcggagaagcaaaaagccgttgtc
aaacaaattaggcagggcagcgtagatattgttgtgggcacgcatcgtctgctgtccaag
gacatccaattcaaagatctgggtcttctcattgtggatgaggaacagcgcttcggcgtg
aaagacaaagaaaagatgaagaagatcaaagaaaatgtagatgttctgacgttgtctgcc
acgcctatcccgcgcacgttgcagctttcattgacagggattcgtgatatgagcttattg
gaggagccgccggaggaacgctatccgactatttcctatgtgatggagacggatcctgtc
gttttgcgcgatgcgatacggcgcgagctcgatcgaaacggacaggtctacgtggtgcat
aatcgggtgcacgatatccactttgcttatgaacgtttgcaggccttggtgccggaagca
agaatcgtggtagcgcacgggcagatgagcattcgtgaactcgagaacgtgatggaacaa
tttgtttcaggcgaggctgatattctgctggctacaacgattattgaaacggggatggat
attgccaatgtgaatacgctcatcgtagagcaggcggatcgcatgggcctttcccagctc
taccagctcaaaggccgtatcgggcgttcggaccgtcagagttatgcctatttcacctac
gatcgttccaaggtgttatccgaaatctctgagaagcgtttgaaggcaatacgtgatttt
accgaattcggttcaggctacaagattgccatgcgcgatttggaactgcgcggtgccggc
aatctcttgggcgagagtcagtccggacatattgaatccatcgggtatgaactctatgtg
cgtatgttagaagaagccgtctctcgcgccaaaggcgaggccaagactgtgcatgcaggg
gatattaacgtggatgtgaaggtgagtgccttcattcctgacgaatacatccctcaaagt
tctgacaagatcatgatgtatcgtcaaatcgcttccattgaaaatgaagaggaatacagt
aaaattgtagaggagctcctggaccgcttcggcgatccaccggagagcgtggaaaatctg
ttggacattgctctgatcaaacgatgggcgagcgatttgggattttcgcgcatcaaggag
acgaaggaagccattgaattgcgttatgaaaaattcgaacaattttctgtggagcaactg
aaggcgatttcggagggatacagcggaccgctgacttttgattttcaaaaggaaccgcgt
tttaagattgcggtttcaccccataaactgaaggatacgaaacgtttgttgcaactcatg
acgcaactgaaaaacagggaggaaaaggaatga
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