Leishmania martiniquensis: 92510944
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Entry
92510944 CDS
T10333
Symbol
LSCM1_00794
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lmat Leishmania martiniquensis
Pathway
lmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92510944 (LSCM1_00794)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmat03019
]
92510944 (LSCM1_00794)
03036 Chromosome and associated proteins [BR:
lmat03036
]
92510944 (LSCM1_00794)
Enzymes [BR:
lmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
92510944 (LSCM1_00794)
Messenger RNA biogenesis [BR:
lmat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
92510944 (LSCM1_00794)
mRNA degradation factors
5'-3' decay
Decapping complex
92510944 (LSCM1_00794)
Chromosome and associated proteins [BR:
lmat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
92510944 (LSCM1_00794)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
92510944
NCBI-ProteinID:
XP_067174537
UniProt:
A0A836G718
LinkDB
All DBs
Position
35:<126746..>127963
Genome browser
AA seq
405 aa
AA seq
DB search
MSDTNWKAQLNAPQKSTRKKTEDVESRRNVNFEEYALRRELQMGIFEKGFEKPSPVQEEA
IPVALQGKDVLARAKNGTGKTASFVIPVLEKVDTRESYVQALLMVPTRELALQTAQVTKE
LGKHISGLEVMVTTGGTTLRDDILRLTSKVHILVATPGRVLDLASKKAVDLSHCHILVLD
EADKLLSQEFMEIIDDLYTYLPSQLQSMLFSATFPVTVKTFAERHLHNPYEINLMDELTL
KGVTQYYAFVEERQKIHCLNTLFNKLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHA
RMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSG
RFGHLGVAINFVTYDDRYNVYRIEQELDTEIKAIPAEIDPELYAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaccaactggaaggctcagctgaacgcgccccagaagagcacgcggaagaag
acggaggatgtggagtctcgccgtaacgtcaactttgaggagtacgccctgcgccgcgag
ctgcagatgggcatcttcgagaagggcttcgagaagccgagccctgtgcaggaagaagcc
atacccgtcgcccttcagggcaaggacgtgctcgcccgtgccaagaatggtaccggcaag
acagcctccttcgtgattccggtgcttgagaaggtcgatacccgtgagtcgtatgtgcag
gcgctcctgatggtgccaacccgtgagctggccctgcagaccgcacaggtgacgaaggag
ctgggcaagcacatctccggtctggaggtgatggtgaccactggtggcacgacgctgcgc
gatgatattcttcgcctgacgagtaaggtgcacattttggtggcgaccccgggtcgtgtg
cttgatctggcgagcaagaaggcggttgacctttctcactgccatattctggtgctggac
gaggccgacaagctgctgtcccaagagttcatggagatcatcgacgacctgtacacctac
ctcccatcgcagctgcagtccatgctcttctcggccacgttcccggtgacggtgaagacg
ttcgcggagcgtcacctgcacaacccttacgagatcaacctgatggacgagctgaccttg
aagggtgtgacgcagtactacgcctttgttgaggagcgccagaagatccactgtctcaac
acactcttcaacaagctgcaaatcaatcagtctatcatcttctgtaatagcgtcaaccgt
gtggagctgctcgcgaagaagattacccagctcggctatagctgctactacatccacgcc
cgcatgcagcagcagcatcgtaatcgtgtctttcatgacttccgcgagggccactgccgc
aacctcgtctgctccgacctcattacccgtggtatcgacattcaggcagtgaacgtcgtc
atcaactttgacttccccaagtatgccgagacgtatctgcaccgcatcggccgctccggc
cgcttcggtcaccttggtgttgctatcaacttcgtgacatacgatgaccgctataatgtc
taccggattgagcaggagttggacacagagatcaaagcgatcccggctgagatcgaccct
gagttgtacgcggcgtaa
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