Leishmania martiniquensis: 92511398
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Entry
92511398 CDS
T10333
Symbol
LSCM1_01264
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
lmat Leishmania martiniquensis
Pathway
lmat03015
mRNA surveillance pathway
lmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
92511398 (LSCM1_01264)
09123 Folding, sorting and degradation
03018 RNA degradation
92511398 (LSCM1_01264)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmat03019
]
92511398 (LSCM1_01264)
03041 Spliceosome [BR:
lmat03041
]
92511398 (LSCM1_01264)
Messenger RNA biogenesis [BR:
lmat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
92511398 (LSCM1_01264)
mRNA cycle factors
Stress granule specific factors
92511398 (LSCM1_01264)
Spliceosome [BR:
lmat03041
]
Complex C
Other components
Complex C specific factors
92511398 (LSCM1_01264)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_7
DUF4523
RRM_8
Pkinase_C
Motif
Other DBs
NCBI-GeneID:
92511398
NCBI-ProteinID:
XP_067174991
UniProt:
A0A836GZD0
LinkDB
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Position
35:<1926072..>1927754
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AA seq
560 aa
AA seq
DB search
MTAIVQETAAPVAPLPVVRQSMQIASIYVGDLDAAINEPQLVEMFRPFGTILNVRVCRDI
ITQRSLGYGYVNFDNRDSAEKAIESMNFKRVGGKCVRLMWQQRDPALRYSGSGNVFVKNL
EKDVDSKRLHDLFTKFGSILSCKVMEDEEGRSRGYGFVHFKDEASAKDAIVKMNGAPGHA
SEDKKALYVANFIRRNARLAALVANFTNVYIKQVLPTVNKEVIEKFFAKFGGITSAVACK
DKNGRVFAFCNFEKHDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYM
QHQSLGNNLYVRNFDPEFTSADLLELFKEYGEVKSCRVMMSESGASRGFGFVSFSNADEA
NAALRELNGRMLNGKPLIVNIAQRRDQRYTMLRLQFQQRLQLMMRQMHQPMPFVGGSARP
MRGRGGRPPQGGRAQGQPMPMPSPQQPPAPVHPPGFATPSAVGFVQATPKHSPGQVPETP
PLPPITPQELESMSPQEQRAALGDRLFLKVYDIAPELAPKITGMFLEMNPKEAYELLNDQ
KRLEERVTEALCVLKAHQTA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactgctattgtccaggagacggctgccccggtggcgccgctgcctgtggtgagacag
tcgatgcagatcgcctccatctacgttggcgacctcgatgccgcgatcaacgagccgcag
ttggtcgagatgttcagaccctttggcacgatcctgaacgttcgtgtgtgccgcgacatc
atcacacagcgctcactgggctacggctacgtcaactttgacaaccgcgacagcgcagag
aaggcgattgagtcgatgaacttcaagcgcgtcggcggcaagtgcgtgcgcctcatgtgg
cagcagcgcgatcctgcccttcgctacagtggcagcggtaacgtgtttgtgaagaacctg
gagaaggatgtggacagtaagcgcctacacgacctcttcaccaagttcggctcgatcctc
tcctgcaaggtgatggaggacgaggaggggaggagccgcgggtacggctttgtgcacttc
aaggatgaggcgtctgccaaggatgctatcgtgaagatgaacggcgctcccggtcatgca
tcagaggacaaaaaggcactgtacgtggccaattttattcgccgcaacgctcgccttgcc
gcgctcgtggccaacttcacgaacgtgtacatcaagcaggttcttcctaccgtaaacaag
gaagtcattgaaaaattctttgcaaagtttggtggaatcacctccgctgtggcctgtaag
gacaagaacggccgcgtgttcgccttctgcaactttgagaagcacgatgacgctgtaaag
gcggtggaagcgatgcacgaccaccacatcgacgggatcacagcgcctggcgagaagctg
tacgtgcagcgtgcccagcctcgaagcgagcgcctcatcgctcttcgccaaaagtacatg
cagcaccagtccctcggcaataacctgtacgtgcgcaatttcgatcccgagttcactagc
gcggacctcctcgagctgttcaaggagtacggtgaggttaagagctgccgcgtcatgatg
agcgaaagcggtgccagtcgcggcttcggtttcgtgagtttttcaaacgccgacgaggcc
aacgccgcgctgcgcgagctgaacggccgcatgctgaacggcaagccccttattgtgaac
attgctcagcgccgcgaccagcgctacacgatgctgcgcctgcagtttcagcagcgtctg
cagctgatgatgcgccagatgcaccagccgatgccgttcgtgggcggctcagcccgtccc
atgcgcggccgtggcggccgcccgccgcaaggcggtcgcgcgcagggtcaaccgatgccg
atgccctcaccccagcagccaccggccccagtgcacccgccgggttttgccacgccgtcg
gctgtcggcttcgtgcaggcgacgccgaagcactctcccggccaggtaccggagacgccg
ccgctgccgccaatcacgccgcaggagctcgaaagcatgtcgccgcaagagcagcgcgcc
gccttgggtgaccgtctcttcctcaaggtgtacgacattgcaccggagctggcgccgaag
attacgggtatgttccttgagatgaaccccaaagaggcctacgagctgctcaacgatcag
aaacgcctcgaggagcgcgtcacagaggcgctctgcgttctcaaggcgcaccagacagct
taa
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