Leishmania martiniquensis: 92513352
Help
Entry
92513352 CDS
T10333
Symbol
LSCM1_03294
Name
(RefSeq) hypothetical protein
KO
K12828
splicing factor 3B subunit 1
Organism
lmat Leishmania martiniquensis
Pathway
lmat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92513352 (LSCM1_03294)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmat03041
]
92513352 (LSCM1_03294)
03036 Chromosome and associated proteins [BR:
lmat03036
]
92513352 (LSCM1_03294)
Spliceosome [BR:
lmat03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
92513352 (LSCM1_03294)
Complex B
92513352 (LSCM1_03294)
Complex C
U2 SnRNP specific factors
92513352 (LSCM1_03294)
Chromosome and associated proteins [BR:
lmat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
92513352 (LSCM1_03294)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOR1L1_N
SF3b1
UME
HEAT_2
PPP2R1A-like_HEAT
XMAP215_CLASP_TOG
RRP12_HEAT
CEP104-like_TOG
Phage_head_chap
TRI4_N
DHO_dh
Motif
Other DBs
NCBI-GeneID:
92513352
NCBI-ProteinID:
XP_067177450
UniProt:
A0A836HD27
LinkDB
All DBs
Position
28:1005149..1008544
Genome browser
AA seq
1131 aa
AA seq
DB search
MANAEGGEPQALKKHRWEDPTGFGGGEVGGMTPTATRWRSATPRQYGADTPRRTPVLSSE
TSTWRGMATPNATPYMTDFIPTPTFGASGSSGMGGGTPSTFGTPRMGSSGVTAGGSTPLF
ASGSTPRIGGVTPLFTGATPAAGAAFGATPNYQYEGETPLQSHFASSVETQSITTAAIEA
KAKALEKEWRRKNKRLTSEYLNSILPSEFFTVAVVPPDYNPLPPEEPNFYEIAVRSMDVF
AMQAGAASSVTAGLDANGQPIRYDIPEDMGDGMPAMKVEDAAVFVELLKYHKAEKIPDEH
LPSYLLMKNLFKIKNGDTMQRRAGTRYLLDKATIFGSHFIFQRLSYIWSSDILNIEEKHY
FIDFIKSLLQQMGKEARRFTKEVVHLVEPLLTAHERILRDDGKQVLTLLTRVVGFQAVFA
VIREDFGHAESIVRRHTARVMAVVGYAAGTEEVTAALRDMSYAPSALARQTVVRSMAELA
KMVGHALMAALPEMVAMLERLLRDEKRVQRDAALAVAAIAEATAPDGIEELAPLVDVICE
ECMKGIGSMASPFIQAFGALVPLMSPFDAQARTAAMMPNLVNQFSTPEDEFRRVLISVVR
KCVLAEGVTPQFIRQTILEPFFEGFWRVRRLAAERQTSGSLVATTVEIAKKLGSVDVLVK
LSPDMKDESEEYQRMVLTAIKKVVDATGMEAAPDTLVTFVLDGAIAAVRQDELGTSKLVM
NVLATICNALAARLRPYLKQVFDLIKRRRENREASMRAQTADLVSRIAHTVMLADGAVFL
QDLGLSLYERLEDPDPRALSANLRAVRSILAELGSRRFKPSVRELLKRLTFVIKSRNSQV
QNGAIALIEDIATNYDADVDAIHLHQLATRGLFELLDSPQRATRHACARTFGVIAKKIRP
FAIILELVDNFRQDKRQIRICTAVALSAIAKECGPFTIIPYLLNEFKISEGKQVAVIVQH
SVLKAIRYIFEAIGPIGKEYVFPMIPLLERALTETNIQMRRMAVEASRAILLAVAGNDGF
EEVAVHLLNFIHPNLVELLAKNEAKISEERLKMVTAVVSYYEAARVVIEPGKLLQYLLQG
LFHPARKVRDIYRRTYNLLYVGSPESLVPYYPRIENDAAHTYVRHELELLL
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcagagggaggagagccgcaggctctaaagaagcaccgctgggaggacccg
acaggcttcggcggcggcgaagttggcggcatgacgcccacggcgacgcgctggcgctcg
gctacgccgcggcagtatggcgccgacacgccacgccgcacaccagtgctatctagtgag
acgtccacgtggcgcggcatggcgaccccaaacgcgacgccttatatgacagatttcatt
ccaacaccgaccttcggtgccagcggaagcagcggcatgggcggcggcacgccttccacg
tttggcacaccacgcatgggcagcagtggcgtcacagccggcggcagcacgcccctcttc
gccagcggtagcaccccgcgcataggcggggtcacccctctgttcactggggcgaccccg
gcggccggggcagccttcggcgccaccccgaactaccagtacgagggtgagacaccgctg
cagtcacatttcgcttcctctgtggagacgcagtccatcacgacggcggccatcgaggcc
aaggcgaaggcgctggagaaagagtggcgccgcaagaacaagcgactcacgagtgagtac
ttgaacagcatcttacccagtgagttcttcaccgtcgcagtggtgccacctgactacaac
ccgctgcctcccgaggagccaaacttttacgaaatcgccgtgcgttcaatggacgtgttc
gcgatgcaggctggcgcggcgtcgtcggtgacagccggcctggacgcgaacgggcagcct
atcaggtacgacatcccagaggacatgggcgatggcatgcccgccatgaaggtcgaggac
gctgccgtgttcgtcgagctgctgaagtaccacaaggcggagaagatccctgatgagcat
ctgccttcttacctcctcatgaagaacctcttcaagatcaagaacggcgacacgatgcaa
cgccgcgccggcacgcgctacctcctcgacaaggcaacgatctttggcagccacttcatc
ttccagcgcctgagctacatctggagctctgacattctaaacattgaggagaagcactac
ttcatcgattttataaagtcgctgctgcagcagatgggcaaggaggcgcggcggttcacc
aaggaggtggttcacctggtggagccgctgctcacggcgcacgagcgcattctgcgggac
gacggcaagcaggtactgaccttgttgacacgggtcgtggggttccaggcggtattcgcg
gtgattcgagaggactttggccacgccgagagtatagtgcgccgccacacggctcgcgtc
atggcggtggtcggttacgccgccggtaccgaggaggtgacggcggcgctgcgcgacatg
tcctacgccccgtcggcgctcgctcggcagacagtcgtgcgctcaatggcggagctggcg
aagatggtgggccacgcgctcatggcggcgcttccggagatggtggcgatgctggagcgc
ttgctgcgcgacgagaagcgtgtgcagcgtgacgcggccctggcggtggcggcgatcgca
gaggcgacggcaccggacggcattgaagagctagcaccgctggtcgacgtcatctgcgag
gagtgcatgaagggcatcggcagcatggcgtcgcccttcatccaagcttttggtgcgctg
gtccccctcatgtcccccttcgacgcgcaggctcgcacggcggcgatgatgccaaacctc
gtcaatcagttcagcacacctgaggacgagttccgccgcgttctcatatccgtcgtgcgg
aagtgcgtcttggcggagggcgtgacgccgcagttcattcgtcagacaattttagagccg
ttcttcgagggcttctggcgcgtgcgccgcctcgccgcggagcgtcagacatcaggcagt
cttgtggcgacgacagtcgagattgcgaagaagctcggcagcgtggatgtgctcgtcaag
ctgtcgccggatatgaaagatgagagcgaggagtaccagcgcatggtgctgaccgccatc
aagaaggtcgtcgacgccaccgggatggaggctgcccccgatacgctcgtaaccttcgtc
ctcgacggcgccatcgccgccgtgcgccaggatgagcttggcacgagcaagttggtgatg
aatgtgcttgcaaccatctgcaacgcgcttgcagcgcggctgcggccgtacctgaagcag
gtgttcgacttgatcaagcgccgccgcgagaaccgtgaggcctcgatgcgggcgcagacg
gctgacctagtctcacgcatcgctcacacggtcatgctggcggacggcgccgtgttcctg
caggacctggggctgagcctgtacgagcggctcgaggacccggacccgcgggcgctgagc
gcgaacttgcgcgcggtgcgctccatcttggctgagttaggctcccgccgattcaagccc
tcggtgcgtgagctgctgaagcgtctcaccttcgtcattaagagccgcaacagtcaagtg
cagaacggcgccattgccctcatcgaggatatcgcgaccaactacgatgcggatgtcgac
gcgattcacctgcaccagctggccacccgcgggctctttgagctgctggactccccgcaa
cgagcgacacggcacgcatgcgcgcgcacctttggcgtgatcgcgaagaagattcgcccc
ttcgccatcatcctggagctggtcgacaacttccgtcaggacaagcggcagattcgtatc
tgcacggccgtggccctcagcgccatcgcgaaggagtgcggccccttcaccatcatcccg
tacctcctgaacgagttcaaaatcagcgagggaaagcaggtggccgtcattgtgcagcac
tcggtgctcaaagcgatccgctacatcttcgaggcgattggcccgataggcaaggagtac
gtcttcccgatgattccgctgctggagagggccttgacggagacgaatatacaaatgcgc
cgcatggctgtggaggccagtcgcgcgattctgctggccgtggccggcaacgatggcttc
gaggaggtcgcggtgcacttgctgaacttcatacacccgaaccttgtggagttgctggca
aagaacgaggcgaaaattagcgaggagcgcctcaagatggtcacagcagtcgtgagctac
tacgaggccgcgcgggtggtgatcgagcctgggaagctgctgcagtatctcctgcagggc
ctcttccacccagcgcgcaaggtgcgcgacatctaccgccgcacttacaacctgctttat
gtcggcagcccagagagccttgtcccctattacccacgcatcgagaatgatgcggcgcac
acgtacgtgcgccacgagcttgagcttctcctatga
DBGET
integrated database retrieval system
