Leishmania martiniquensis: 92513490
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Entry
92513490 CDS
T10333
Symbol
LSCM1_03436
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lmat Leishmania martiniquensis
Pathway
lmat04142
Lysosome biogenesis
lmat04145
Phagocytosis
lmat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
92513490 (LSCM1_03436)
04142 Lysosome biogenesis
92513490 (LSCM1_03436)
04148 Efferocytosis
92513490 (LSCM1_03436)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmat04131
]
92513490 (LSCM1_03436)
Membrane trafficking [BR:
lmat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
92513490 (LSCM1_03436)
Hops complex
92513490 (LSCM1_03436)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS18_solenoid_2nd
Clathrin
zf-RING_Vps41
zf-RING_UBOX
zf-Vps39_C
zf-RING_2
zf-RING_5
zf-C3HC4_2
Clathrin_H_link
Motif
Other DBs
NCBI-GeneID:
92513490
NCBI-ProteinID:
XP_067177588
UniProt:
A0A836H576
LinkDB
All DBs
Position
27:complement(<377071..>380334)
Genome browser
AA seq
1087 aa
AA seq
DB search
MAMAHAAPRDSRSHVDALHDPVVPHFELVTYPLSDRQDPIEDVNCQSGVMAVLRRSGWLE
VRDAGEDRVLLRTLVRNPHKVFVHPQGTYVVATASDGEVSVQRTFDARMCATTQLQATDT
LSGFVQGSREVVVGECVGWLPQDSYGAALKDSADALGAHTASVSTTQGSAMVSGAEWSCL
MGVNKGRAIFALHVHARSSNSSRFKLRAEVAWSLPSPAMSLFPIRSIVFAKMGASGCVLL
MSTATTLHEAHSRSISSPALLFHALSSGDVKLRTQTVPLYAGSASAPEVDGRVLVYRASC
ASAPQSYVWNSTAGVVHGLFRRDVSSDIVDENERLPFGASSSAEEEEEEGARVNQQSLSL
ARFADSPDATGSGADKGALPPSVAPIAVIPTAFHMIVVYPRRCLVLHQPPGASWRSPADS
GGGAAGRFAPPLPAEVAQRIRFDPFRASPPPSSDLCGAIHDAEARRFFLFSRTHLWEVLI
EDEAHQQWRLFLERGQDAQASLAVRKRYMDAACRLAFYSDTQRNLCLFHRGRFFLDCGAT
RHAITQFAMCDWFEDIYALLTAYRHTDLRTAFVEARFQFLLSHLVSLDDWAPQLTCLFVL
LLLAKLDCVARSAAAPAAEADLHEFLLSTVERCGSFLKEKAVYELVVRLLEEQGYGESAL
LFAKTMQHTRYVVAYHVAQQQFDEAVKVLGTCHGSAARLLPWYEFTSVLMQHRPVALVTA
LLRALAKEARWGRVLPLQMERLIPSFMRYNISMNEVAGNVEHQVVVLLDQCIHRYGCPSG
AVHNYYVRLLAQTRDAVRLDDFISSSLFFDTGYALRMCLEHRCTTAAVALYKHMHLYRDA
VTTALYAPHERLTGSGASEDANVAKPLEDDDALPGIVAAEDTLRGLVGKVGKDELRHLWM
LTAEQALASHNVAAALAVVQESGGILHTEDVLRRIDDVNLVDDFRDAICEYFDTYAQQKR
QLSRTQDEVYQTAEGVKKDLRQAREQFGYITASQRCPLCHRTLLQSNTPYLVYPNCGHVV
HEACAISRLESIGGLEAFLADEGIAPHVLDGVSDTRQLAQQDCVLCGEAVVVEVDIPLCR
KDVAWDL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcacacgcggccccgcgtgacagtcggagccacgttgatgcgttgcacgac
cctgtggtaccgcacttcgagcttgtcacctaccccctttctgatagacaggaccctatt
gaagatgtcaattgccagtccggtgtaatggcggtgctgcgccgcagtggatggctcgag
gtccgggatgctggggaggaccgcgtgctgctccgcacactcgtgcgcaaccctcacaaa
gtctttgtgcatccccaaggcacttatgttgtggcgacagcctctgacggtgaggtcagc
gtgcaacgcacgttcgatgcacgcatgtgcgccaccactcagctacaggcgaccgacact
ctcagtggatttgtgcaggggtcgcgggaggtcgtcgttggtgagtgcgttgggtggctt
ccacaggacagctatggggcggcgctgaaagacagcgcggacgccttgggagcccatacc
gcgtccgtgtctaccacgcaaggctcggcaatggtgagcggcgccgagtggagctgcttg
atgggggtgaacaaggggcgtgccatctttgctctgcacgtgcacgcccgaagcagcaac
tccagtcggttcaagctgcgcgcagaggtggcgtggtcgctgccctcgccagcaatgtcc
ctcttcccgattcgctccattgtttttgcgaaaatgggggcaagcggctgcgtgctgctg
atgtccactgccaccactctgcacgaagcacacagccgcagcatctcctccccagccctt
ttgtttcatgccctcagctcgggcgacgtcaagctccgcacgcagacggtgcccttgtac
gccggctccgcctccgcaccggaggtggacgggcgggtgcttgtctaccgtgcctcttgc
gcctccgcgccgcagtcgtacgtgtggaatagtaccgcgggtgtcgtgcacggactgttt
cgccgcgatgtttcttcggacattgtcgacgaaaacgagcggctgccgtttggtgcttcg
tcctccgcggaagaggaggaggaggagggggctcgggtgaatcagcagtcgctctcgctt
gcaaggttcgcagacagccctgacgcgactggctctggagctgacaagggcgcgctgcca
ccgtcggttgcccccatcgcagtgatcccgacggcgttccacatgattgtagtgtacccg
cgtcgatgtctggtgctgcaccagcctccaggagcttcgtggcgcagccctgccgacagc
ggcggcggtgccgccgggcgcttcgcacccccgctgccggctgaggtggcgcagaggatt
cgcttcgatccgttccgggcatcaccgccgccgtcctctgacctgtgcggcgccatccac
gacgcagaggcgcgccgattttttcttttcagccgcacgcacctgtgggaagtgctcatt
gaggacgaggcgcaccagcagtggcgtctctttctggagcgcggacaggatgcgcaggcg
tcattggcggtgcgtaaacgctacatggatgctgcgtgccgccttgccttttactcggac
acccagcgcaacctctgcctgtttcatcgcggccgattctttctcgactgcggcgccaca
cgccacgccatcacccagttcgccatgtgcgactggttcgaggacatctacgcgctgttg
acggcataccgccacacggacctgcgcacggcgtttgtggaggcccgctttcagtttctg
ctgtcgcacctcgtctcgctcgacgactgggcgccgcagctaacctgcctgtttgtgctt
ctcctcctcgcgaaattagactgcgttgcgcgcagtgccgcggcgcccgccgccgaggcg
gaccttcacgagttcctgctgagcacagtggagcggtgcggttcttttctgaaggagaag
gcggtgtacgagctggtggtacggctgctggaggagcagggctacggcgagagtgcgttg
ctgtttgccaagacaatgcagcacacacgctacgttgtcgcctaccacgtcgcccagcag
cagttcgacgaggccgtcaaggtcctcggcacatgccacggctctgcggcccgccttctg
ccctggtacgagtttacctctgtgctgatgcagcatcggccggtggccttggtgacggca
ctgctgcgtgcgcttgcgaaagaggcgcggtggggtcgggtgcttcccctgcagatggag
cggctgataccgtcgtttatgcgctacaatatttcgatgaacgaggtggccggtaatgtg
gagcatcaggtggtggtgctgctcgatcagtgcattcatcgctatggctgcccctcgggc
gccgtgcataactactacgttcgcctgcttgcgcagacacgcgatgccgtgcgcctcgac
gacttcatcagcagctctcttttcttcgacacgggctacgcgctgcgcatgtgcctggag
caccgttgcacgaccgctgccgtggccctatacaaacacatgcatctctaccgcgacgcc
gtcaccacagccctgtacgcacctcacgagcgtctcacaggcagcggcgcgagcgaggat
gcgaacgtagccaagccgttggaagacgacgatgcgcttccggggattgtcgccgccgaa
gacacgctgcgcgggcttgtcggaaaggtcggtaaagacgaactgcgccatctgtggatg
ctgacggcggagcaggcgctcgccagccacaacgttgccgcggccctcgcagtcgtacag
gaatccggcggcattctccacaccgaggatgtcctccgtaggatcgacgacgtgaatctc
gtcgacgatttccgggacgccatctgcgagtacttcgacacctatgcgcaacagaagcgg
cagctgagccgaacgcaggatgaggtgtaccagaccgcagaaggcgtgaagaaggatttg
cggcaggcgcgcgaacagtttgggtacatcacagcgagccagcgctgtccactgtgccac
cggacactgctgcagagcaatacgccatacttagtgtaccccaactgcggccatgtggtg
cacgaggcttgcgcaatctcacgactcgagtcgatcggcggtcttgaggcctttctggcc
gacgagggcatcgcgccgcacgtcctggacggcgtcagcgacacccgtcagctcgcgcag
caggactgcgtgctgtgcggcgaggccgttgtggtggaggtcgacattcctctgtgccga
aaggacgtcgcgtgggatctttag
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integrated database retrieval system
