Leishmania martiniquensis: 92513925
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Entry
92513925 CDS
T10333
Symbol
LSCM1_03880
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
lmat Leishmania martiniquensis
Pathway
lmat03030
DNA replication
lmat03410
Base excision repair
lmat03420
Nucleotide excision repair
lmat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92513925 (LSCM1_03880)
03410 Base excision repair
92513925 (LSCM1_03880)
03420 Nucleotide excision repair
92513925 (LSCM1_03880)
03430 Mismatch repair
92513925 (LSCM1_03880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmat03032
]
92513925 (LSCM1_03880)
03036 Chromosome and associated proteins [BR:
lmat03036
]
92513925 (LSCM1_03880)
03400 DNA repair and recombination proteins [BR:
lmat03400
]
92513925 (LSCM1_03880)
DNA replication proteins [BR:
lmat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
92513925 (LSCM1_03880)
DNA Replication Termination Factors
ELG1-RFC complex
92513925 (LSCM1_03880)
Chromosome and associated proteins [BR:
lmat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
92513925 (LSCM1_03880)
DNA repair and recombination proteins [BR:
lmat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
92513925 (LSCM1_03880)
Check point factors
HRAD17(Rad24)-RFC complex
92513925 (LSCM1_03880)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
RuvB_N
RCF1-5-like_lid
AAA_22
AAA_11
AAA_lid_RFC1
AAA_16
SLFN-g3_helicase
ResIII
nSTAND_NTPase5
AAA_28
Mg_chelatase
AAA_30
AAA_5
AAA_14
Viral_helicase1
DUF815
nSTAND3
T2SSE
AAA_33
AAA_19
NPHP3_N
ATPase_2
bpMoxR
AAA_7
Motif
Other DBs
NCBI-GeneID:
92513925
NCBI-ProteinID:
XP_067176781
UniProt:
A0A836H7K6
LinkDB
All DBs
Position
30:complement(<974248..>975312)
Genome browser
AA seq
354 aa
AA seq
DB search
MSVLPQPAQKKARTEGTSDTADSAAPWVEKYRPRTLAEVQAQDEAVSALRACLKEGNNMP
HLLFHGPPGTGKTTSILAVAHELFGPDYIRSRVRELNASDDRGINVVREKVKIFAQGAVS
SNGSSVTQSDGKVYPVPPFKLIILDEADALLPDAQGALRRMMEDFSDVTRFCILCNYVSR
IIDPIASRCAKYRFKPLVKSALYQRIEYVAQSEGITLSPLSLQALDAVSGGDLRLAIMHL
QSAQKASGSDLTKEDFVSVSGSVPADVMQQYISALLSHRLEEVIQASRRLVAEGFAAAQV
LLQLQRYLVSTECPLNSAQRGRIMLKLCQTERRLADGGDDYLQLLDIGSVICSS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtactgccacagccggcgcagaagaaggccaggacggagggcacatctgacact
gctgactctgccgcgccgtgggtggagaaatatcggccacgcacactggcggaggtacag
gctcaggatgaggctgtcagtgccctacgcgcatgcttgaaggaggggaacaacatgcct
caccttctctttcatggaccgcctggcacgggcaagacgacgtcgatcctagcagtggca
cacgagctgtttggtcccgactacattcgcagtcgggtgcgcgagctgaacgcctccgat
gaccgcggtatcaacgtggttcgggagaaggtgaagatcttcgctcaaggcgccgtctcg
agcaatggcagcagcgtcactcagtcggacggaaaagtctacccagtgccgcctttcaag
ctcattattctggacgaggctgacgcgctgctccccgatgcgcagggcgcgctgcggcgg
atgatggaggacttcagtgacgtgactcgcttctgcatcctctgcaactatgtgagccgt
atcatcgatccgattgccagccgatgcgccaagtatcgattcaaaccgcttgtgaagagc
gcactttatcagcgtatcgagtacgtggcccaatccgagggcataaccctctcacccttg
tcgctccaagccttagatgcggtgagtggtggcgatctgcgcctcgccattatgcatctc
cagtcggcacaaaaagcgagcgggagcgacctgacgaaggaggactttgtctccgtctcg
ggcagcgtgccggcggacgtgatgcaacagtacatcagcgcgctgctctcgcatcgcttg
gaggaagtcatccaggcatcgcgccggctggtggcggagggcttcgccgccgcgcaggtg
ctactgcagctgcagcgttatcttgtcagcactgaatgcccgctgaactcggcccagcgc
gggaggatcatgctcaagctgtgccagacagagcggcgccttgctgacggcggagacgac
tacctgcagctgctcgacatcggaagtgttatatgctcctcatag
DBGET
integrated database retrieval system
