KEGG   Leishmania martiniquensis: 92514804
Entry
92514804          CDS       T10333                                 
Symbol
LSCM1_04803
Name
(RefSeq) hypothetical protein
  KO
K03679  exosome complex component RRP4
Organism
lmat  Leishmania martiniquensis
Pathway
lmat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    92514804 (LSCM1_04803)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmat03019]
    92514804 (LSCM1_04803)
Messenger RNA biogenesis [BR:lmat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     92514804 (LSCM1_04803)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     92514804 (LSCM1_04803)
SSDB
Motif
Pfam: RRP4_S1 KH_6 RRP40_S1 Gp10A-like NEDD4_Bsd2
Other DBs
NCBI-GeneID: 92514804
NCBI-ProteinID: XP_067180065
UniProt: A0A836KRT9
LinkDB
Position
14:9675..10565
AA seq 296 aa
MSSSVVIVGDSICGGDADQKLGTSLDEVYLRGFNTFSGNHPSDVALLHEGAGEIVSAING
QIEVTDRVISVKGLLPRYQPEIGDVVVGRILEVAGNKWQVDVNSTQTAVMLLSNVTEPGG
ILRRRGRGDELGMRQIFDQDDLIAAEVQRISPDGVASLHTRAAAKYGQLSGLGILVSVRP
SLVKRAKHQFLELESFSTQLIIGMNGNIWVCPMESLATMTDGSEHATDARQNVARVANCI
KALGTGRVQINPASIEASVMASLEAGLSAFELTTEKHRGAFLARVVEVVGMKRHRQ
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtcatctagcgtagtgattgtgggtgactctatctgtgggggtgacgctgatcaaaag
ctcggcacgagtctcgacgaagtttatctgcggggatttaatacattttccggaaaccat
ccaagtgacgtagcgctgctccacgaaggggcaggggaaatagtgtctgctatcaatggg
caaatagaagtcacagaccgtgtgatatcggtgaaagggctgcttccacggtatcaaccc
gaaatcggtgatgtggtagttggccggatattagaagttgccggcaacaagtggcaggtg
gatgtgaattcgacccaaactgcggttatgcttctctcaaacgtaacagagcctgggggt
attttgcgacggcgagggcggggcgatgagctagggatgcgtcagatttttgatcaagat
gacttgattgcggcagaggttcagcggatctcgcccgatggtgtcgcatcactccacacg
cgcgcagccgcaaagtatgggcagctatcggggcttggtattttggtgagtgttcgcccc
tccttggtgaaacgtgctaagcatcagtttctggagctcgagagcttcagcacgcagctg
attattggtatgaatggcaacatatgggtttgcccaatggaatccctcgctaccatgaca
gatgggagcgagcacgctaccgacgcacgccaaaacgtggcacgtgttgcgaactgcata
aaagcactaggaacgggacgagttcagatcaacccagcatccattgaagccagcgttatg
gcatcgctggaagcaggcttgtcagcgtttgaactgactactgaaaagcaccgaggtgct
tttttggcacgcgttgtagaagtggtaggcatgaagcgccatcgtcaatag

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