KEGG   Leishmania martiniquensis: 92515379
Entry
92515379          CDS       T10333                                 
Symbol
LSCM1_05402
Name
(RefSeq) hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
lmat  Leishmania martiniquensis
Pathway
lmat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92515379 (LSCM1_05402)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmat03041]
    92515379 (LSCM1_05402)
Spliceosome [BR:lmat03041]
 Complex C
  Other components
   Step II factors
    92515379 (LSCM1_05402)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_NWD2_C NBCH_WD40 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_EIPR1 DUF4589 Beta-prop_NOL10_N Beta-prop_SCAP
Other DBs
NCBI-GeneID: 92515379
NCBI-ProteinID: XP_067178232
UniProt: A0A836H087
LinkDB
Position
25:complement(771458..773023)
AA seq 521 aa
MFPTDRPPTAADMARLQAFRGEGQLDAELAADAYLHSLMKRRRDNVAELLALYTSPEDAR
KAYPDPPPSLLQVADDGSLGGKAKVVAETGAGVPPTGASAQALKKARRENAAATLSASSG
AGAAATSAARLLTAADGSPKAAFEDGVERVNYLGKSFLEPPSSVLEHEESTKQKACKPPR
TMRGVFKIPDGYGAAASTSSSAPTSSSSLVNPEGSSSGERHPGRASGIQQLRWAPPAYGH
LLFSGDIGGECRLWNSSTRQLLATFSAHTQPIKSLEVTTNAAIMSTGSVDGTVAMWDVET
GVCAHVLTNPDRLPVVQHLHHPSDEAHLLLAAVDRKVVLYDVRVGCSKYQREYTGHMGTI
FNLTLLSEGSKMLTTSEDRTLRTWDYRSPVQIKQFADAAMHAITHVLHHPTQPEFLAAQS
LNNKVIVFRDDGGGRLRLLHDREFTGHTISGTRCQLSFSHDGRYLSSGDIGGKLYVWEWA
TNKLEKFFKAHAQMLVSHLWHPIEPTKVVTAAWDGHIKCWA
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtttcccaccgatcgacctcccacggcggcagacatggcccgactgcaggccttcaga
ggtgaaggccagctcgatgcagagctcgcagcggacgcatacctgcattcactcatgaag
cgccgccgcgacaacgttgccgagcttctcgcgttgtacaccagcccagaggacgctcgc
aaggcctaccccgacccgccaccctcactgcttcaagtcgccgacgacgggtccttaggt
ggtaaggcaaaggtggtagctgaaacaggcgccggtgttccacccaccggtgccagcgcg
caagcgctcaagaaggcgcggcgcgagaatgcggcagcgacgctcagcgcatcctctggt
gctggcgcagccgccacatcggctgctcgccttttaaccgccgcggacggatcaccaaag
gccgcctttgaggatggtgtggagcgggtcaactacctcggcaagtccttcttggagccg
ccgtcgagcgtgctggagcacgaggagtcgacgaagcagaaggcgtgcaagccgccccgc
accatgcggggtgtgttcaagatcccggacggctatggagcagcggccagcacctcctcc
tccgcccccacatcgtcttcgtctctggtgaacccagagggtagcagcagcggcgagcga
caccccggcagggcatctggcatacagcagctccgctgggccccacctgcctacggccat
ctactcttctcgggtgacattggcggcgagtgccggctgtggaattcgtcgacgcgacag
ctgctcgcgaccttctcggcgcacacgcagccgattaagagtctcgaggtcaccacgaac
gcggcaatcatgtcgaccggctcagtggacggtaccgtggcgatgtgggacgtcgagacc
ggcgtttgcgcgcacgtgctcaccaatccggaccgcctcccagtcgtgcagcaccttcac
catccctccgatgaggcgcaccttctcttggccgccgtggacaggaaagtcgttctctac
gacgtgcgcgtgggctgcagcaagtaccagcgcgagtacacggggcatatgggcaccatc
ttcaacctgacgctgctgagtgagggcagcaaaatgctcaccacctcagaggaccgaaca
cttcgcacgtgggactatcgaagtcctgtgcagatcaagcagttcgctgatgcggcgatg
catgccatcacacacgtattgcaccacccgacgcagcccgagttcctcgccgcgcagtcg
ctcaacaacaaggtcattgtcttccgagacgacggcggcggccgcctacgactcctgcac
gaccgcgagttcactgggcacactatttcgggtacgcggtgtcagctgagtttcagccac
gacggccgctatctgtcaagcggcgacatcggtggcaagctgtacgtatgggagtgggcg
acaaacaaactggagaagttcttcaaggctcacgcgcagatgctggtgtcgcacctgtgg
cacccgatcgagcccaccaaggtggtgacagctgcctgggatggccatatcaaatgttgg
gcgtga

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