Leishmania martiniquensis: 92515379
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Entry
92515379 CDS
T10333
Symbol
LSCM1_05402
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
lmat Leishmania martiniquensis
Pathway
lmat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92515379 (LSCM1_05402)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmat03041
]
92515379 (LSCM1_05402)
Spliceosome [BR:
lmat03041
]
Complex C
Other components
Step II factors
92515379 (LSCM1_05402)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
NBCH_WD40
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_EIPR1
DUF4589
Beta-prop_NOL10_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
92515379
NCBI-ProteinID:
XP_067178232
UniProt:
A0A836H087
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Position
25:complement(771458..773023)
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AA seq
521 aa
AA seq
DB search
MFPTDRPPTAADMARLQAFRGEGQLDAELAADAYLHSLMKRRRDNVAELLALYTSPEDAR
KAYPDPPPSLLQVADDGSLGGKAKVVAETGAGVPPTGASAQALKKARRENAAATLSASSG
AGAAATSAARLLTAADGSPKAAFEDGVERVNYLGKSFLEPPSSVLEHEESTKQKACKPPR
TMRGVFKIPDGYGAAASTSSSAPTSSSSLVNPEGSSSGERHPGRASGIQQLRWAPPAYGH
LLFSGDIGGECRLWNSSTRQLLATFSAHTQPIKSLEVTTNAAIMSTGSVDGTVAMWDVET
GVCAHVLTNPDRLPVVQHLHHPSDEAHLLLAAVDRKVVLYDVRVGCSKYQREYTGHMGTI
FNLTLLSEGSKMLTTSEDRTLRTWDYRSPVQIKQFADAAMHAITHVLHHPTQPEFLAAQS
LNNKVIVFRDDGGGRLRLLHDREFTGHTISGTRCQLSFSHDGRYLSSGDIGGKLYVWEWA
TNKLEKFFKAHAQMLVSHLWHPIEPTKVVTAAWDGHIKCWA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccaccgatcgacctcccacggcggcagacatggcccgactgcaggccttcaga
ggtgaaggccagctcgatgcagagctcgcagcggacgcatacctgcattcactcatgaag
cgccgccgcgacaacgttgccgagcttctcgcgttgtacaccagcccagaggacgctcgc
aaggcctaccccgacccgccaccctcactgcttcaagtcgccgacgacgggtccttaggt
ggtaaggcaaaggtggtagctgaaacaggcgccggtgttccacccaccggtgccagcgcg
caagcgctcaagaaggcgcggcgcgagaatgcggcagcgacgctcagcgcatcctctggt
gctggcgcagccgccacatcggctgctcgccttttaaccgccgcggacggatcaccaaag
gccgcctttgaggatggtgtggagcgggtcaactacctcggcaagtccttcttggagccg
ccgtcgagcgtgctggagcacgaggagtcgacgaagcagaaggcgtgcaagccgccccgc
accatgcggggtgtgttcaagatcccggacggctatggagcagcggccagcacctcctcc
tccgcccccacatcgtcttcgtctctggtgaacccagagggtagcagcagcggcgagcga
caccccggcagggcatctggcatacagcagctccgctgggccccacctgcctacggccat
ctactcttctcgggtgacattggcggcgagtgccggctgtggaattcgtcgacgcgacag
ctgctcgcgaccttctcggcgcacacgcagccgattaagagtctcgaggtcaccacgaac
gcggcaatcatgtcgaccggctcagtggacggtaccgtggcgatgtgggacgtcgagacc
ggcgtttgcgcgcacgtgctcaccaatccggaccgcctcccagtcgtgcagcaccttcac
catccctccgatgaggcgcaccttctcttggccgccgtggacaggaaagtcgttctctac
gacgtgcgcgtgggctgcagcaagtaccagcgcgagtacacggggcatatgggcaccatc
ttcaacctgacgctgctgagtgagggcagcaaaatgctcaccacctcagaggaccgaaca
cttcgcacgtgggactatcgaagtcctgtgcagatcaagcagttcgctgatgcggcgatg
catgccatcacacacgtattgcaccacccgacgcagcccgagttcctcgccgcgcagtcg
ctcaacaacaaggtcattgtcttccgagacgacggcggcggccgcctacgactcctgcac
gaccgcgagttcactgggcacactatttcgggtacgcggtgtcagctgagtttcagccac
gacggccgctatctgtcaagcggcgacatcggtggcaagctgtacgtatgggagtgggcg
acaaacaaactggagaagttcttcaaggctcacgcgcagatgctggtgtcgcacctgtgg
cacccgatcgagcccaccaaggtggtgacagctgcctgggatggccatatcaaatgttgg
gcgtga
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